KEGG   Bubalus kerabau (carabao): 129639817
Entry
129639817         CDS       T11435                                 
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
  KO
K12600  superkiller protein 3
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129639817 (SKIC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bke03019]
    129639817 (SKIC3)
Messenger RNA biogenesis [BR:bke03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     129639817 (SKIC3)
SSDB
Other DBs
NCBI-GeneID: 129639817
NCBI-ProteinID: XP_055421040
LinkDB
Position
1:complement(264420123..264549977)
AA seq 1563 aa
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELHQLWRKLTQLLAECTEDQNNETQQ
LLLTAFENALALSDKIPSEDHQVLYKHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLTDEGEQYCCRLVEMDPQSGAGLIGLGIKALQDKKYEDAVRNLTEGIK
ESPLCTAGWYHLAEAQVRMHKPKEAVLSCNQALKNIDNLGVSGGSLHQKNFCLRLKAEAL
IKLSDYESSEEAIRTLDQVSDANNIPGLLVLKGLAYLNKGSLDEASKIMEDLLSSYPDLT
EVHALEALIHFTKKDYLQAEKCFQQALEKDPEVAEYHYQLGLTYWSMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYKDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQTLGKYKEAVAQYQLIIK
KKEDYVPALKGLGECHLLLAKAALVDYLDGKAVDYIEKALEYFTRALQHRADVSCLWKLV
GDACTTLSAVSPSKVNVSVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLADTGSNSDDLQELLEKSMHCLKKAVRLDSNNHLYWNALGVVSCYSGI
RNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNILQMN
AIPAAQVVLSKYVERIQNYAPAFTMLGYLNEHLQLKKEAANAYHRAILLLQTAEDPDAYY
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALTI
VESEQDKAHILTALAIAEYKQGKMDVAKTLLFKCSILKEPTTESLQALCALGLAMQDATL
SKAALNELLKHSKPNSDYQRSLLTSAICALQGRSVAVQRQASRAVHSNPADPALWSLLSR
VVAQYTQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSNSAEDEKNTALKTIQK
AALLSPGDPAVWAGLMAACHADDTLAVVSSTQPKRMDLYLALLSAVSASIKDKEFFENYN
QSLERWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQPAIILLLRQVQCKPLLESRKPL
PDTVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLS
SLLRLALLALEVCMANVSNDHWPSLVQEATAEALKLCFCPLAVLLQALLQFKRKMGARET
RRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQKL
SSE
NT seq 4692 nt   +upstreamnt  +downstreamnt
atgtccagcaaggaagtaaagactgctctgaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaagaataactat
aatgcctgggtttttattggcgttgctgcagccgagctagaacagcctgatcaggcccag
ggtgcctacaagaaagctgctgaattagagccagaccagctactagcttggcaggggtta
gcaagtttgtatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtttac
caaaagctcctggatctgtatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaactggtggatctgtattaccaagaaaagaaacatgtagaggtggcccgaacatggcac
aaattgataaagacacgacaggaagaaggtgcagacaaccaggagcttcatcagctgtgg
aggaaattgactcagttgctggctgagtgcactgaggaccagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcattggccttatcagataagattcctagcgaagat
caccaagtgctttataaacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttacatttaattgaatcaggaagtcttactgatgagggagaacagtat
tgttgtagactagtggaaatggatccccaaagtggtgcaggtctcataggtttaggcatt
aaagcattacaagacaaaaagtacgaagatgctgttaggaacttaacagaagggataaag
gaaagccccctctgcacagctggatggtatcatctggcagaagcccaagtaagaatgcat
aaacctaaggaagctgttctttcatgcaatcaagctctgaagaatatagataatcttggt
gtgtctggtggcagtcttcatcagaagaatttttgtcttcgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagaggaagcaattcgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttctcaaaggcttggcctatctgaacaagggt
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctaact
gaagtgcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagcaagctcttgaaaaagatcctgaagttgctgaatatcattaccaactt
gggttaacatattggtccatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttaaaggctgccaaactggatacatacatgggcaaagttttctgctatttaggt
cattattacaaagatgtagtaggtgataaaaatagggcccgtggatgttacaggaaagct
tttgaattggatgacaccgatgctgaatctggagctgcagcagttgacttaagtgtcgag
cttgaagagatggaaactgccttagctatcctgacaacagtcactcaaaaggcaagtgct
gggacggcaaagtgggcctggcttaggcgaggcctgtactatctgaaagctggtcagcat
tcccaagcagtggctgatttacaggcagcattaagggcagacccgaaggacttcaattgt
tgggagtcattaggagaggcatatttaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggtggcggca
atacagcaaacccttggtaaatacaaagaggcagtagctcagtaccagctgatcattaaa
aagaaagaagattatgtgcctgctctgaaaggtttgggtgaatgccacctcctgttggca
aaagcagctctagtcgattatcttgatgggaaagctgtagactacatagagaaagcactg
gaatattttactcgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggagacgcttgtaccactctgtctgctgtctcaccatctaaagtgaatgtcagtgtctta
ggagtccttctaggtcagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
cttggaggaagatgttacggtcgtgcattaaaactgatgtctacatctaatacgtggtgt
gaccttggaattaattattatcgccaagcgcaacatctagcagacacaggcagcaactca
gatgaccttcaagagttgctggagaaatctatgcattgtctgaaaaaagctgtgagactt
gacagtaataatcacttatactggaatgctcttggtgtagtttcctgttatagtggtatt
agaaattatgcccttgctcagcactgtttcatcaaatcaatccagtcagaacaaattaat
gctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaaaattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttaatgtgctggattgga
caagctctaattgcagagacagttggaagttatgacaccatggatctcttcaggcacact
acagaactcagtatgcatactgagggagcaataggttatgcgtattgggtctgtacaaca
ttgcaagataagagcaacagagacacagagctgtaccggtataacatcctccagatgaat
gcaattccagcagcacaagtggtcttgagtaaatacgtggagagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgagcatctacagctgaagaaggaagcagca
aatgcataccacagggcaattttgttgttacagactgcagaagacccagatgcttattat
gttacagtaagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaggagttagaagacatcataggtttcgcattagct
ttatttatgaagggtctgtataaggagagcagcaaagcgtatgagagagccttgactatt
gttgaatcagagcaagacaaagctcatatcttgacagctctggcgatagcggagtataaa
caaggaaaaatggacgtagccaagacactgctattcaaatgctctatcttaaaggaacca
acaacggaaagccttcaagccctgtgtgctctcggattggcaatgcaggatgctacactg
tcaaaggctgcacttaatgagttactgaagcacagcaaaccgaacagtgattatcagagg
agccttcttacttcagccatctgtgccctgcaaggccgcagtgtggcagtgcagagacaa
gcatccagagctgttcacagtaacccagctgatcctgctctttggtccctgttgtcccga
gtggttgcccagtatactcaacgaaatgcaaagggaggtgcagtggcaggaaacgtggct
catattctggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcagttg
gctatgggaagcaattcagcagaagatgagaaaaatactgcactaaagaccattcagaag
gcagctctcctttctccaggtgatcctgctgtctgggctgggctgatggcagcttgtcat
gctgatgatacactggctgtagtgagcagcactcagccaaagaggatggatttatacttg
gcactgttatctgctgtttctgcttcaattaaagacaaagaattctttgaaaattacaac
cagtctcttgaaaggtggtctctctctcaagctgtcactggtctaatagacacaggaaga
atatccgaagctgaagccctctgtacaaagaatttaaaaagtaaccctgatcaaccagct
attatcttactcttgagacaagttcaatgtaaaccactcctggagtcacgaaaacctctc
ccagacactgtacttgaagagctgcaaaaaacagtcatgtccaactcaacctctgttccc
gcttggcagtggctggcacacatatatcagtcccaaggaatgatgggtgctgcagagatg
tgttacaggaagagcctgcaagtagcatcccagcagggcagctggagtgggaagctctca
agcctgctgaggctagcactgcttgcgttggaagtctgcatggctaatgtttccaatgat
cactggccgtccttggttcaagaagctacagctgaggccctgaaactttgcttttgtcca
ctggctgtccttttacaagctttgttacaattcaaacgcaaaatgggagcaagagagaca
cggcgacttttggagagagttgtgtatcagcctgggtatcccaaatctattgtttcaaca
gcacgttggtaccttctgagacacttacatgccaaaaatgactacgagctcattgatgtg
ctggtaaacaatgccaaaactcatggagatacaagagcattggaactgaatcagaagttg
tcctcagaataa

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