Bubalus kerabau (carabao): 129646834
Help
Entry
129646834 CDS
T11435
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04151
PI3K-Akt signaling pathway
bke04382
Cornified envelope formation
bke04510
Focal adhesion
bke04512
ECM-receptor interaction
bke04518
Integrin signaling
bke04820
Cytoskeleton in muscle cells
bke04926
Relaxin signaling pathway
bke04933
AGE-RAGE signaling pathway in diabetic complications
bke04974
Protein digestion and absorption
bke05146
Amoebiasis
bke05165
Human papillomavirus infection
bke05200
Pathways in cancer
bke05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129646834 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129646834 (COL4A4)
04518 Integrin signaling
129646834 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129646834 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129646834 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129646834 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
129646834 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
129646834 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129646834 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
129646834 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129646834 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
129646834 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129646834 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bke04147
]
129646834 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
bke00536
]
129646834 (COL4A4)
Exosome [BR:
bke04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129646834 (COL4A4)
Glycosaminoglycan binding proteins [BR:
bke00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129646834 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129646834
NCBI-ProteinID:
XP_055429610
LinkDB
All DBs
Position
3:complement(169270589..169423334)
Genome browser
AA seq
1689 aa
AA seq
DB search
MALVRCPFRCNKLLATNSWSLILILFSVQYAYGGGKKFIGLCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPIGIPGEKGMKGDSGRPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGRPGIDGHNGSRGDPGIPGERGALGPRGPPGLPGEKGEKGNSVFILGATKGM
QGDRGDPGPPGSPGSRGVRGPAGPAGYPGEPGLAGPPGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGMPGMTGPPGPPGPRGEPGIGRKGEKGIPG
FPGPRGDPGSYGSPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGHPGPPGVLVTPSLPL
KGPPGDPGHPGRYGETGAVGPRGPPGAPGRPGEACPGMTGPPGPRGFPGHPGFPGAAGVP
GRADSAPGKPGNQGPTGLPGVPGLPGPPGSDVVYCTVGQPGPQGIKGKVGPPGRRGSKGE
KGNSGLCACQPGPMGPSGPPGPPGRQGSKGDLGLPGWLGEKGSPGPPGAKGSPGPPGKPG
ASGLPGSKGDKGDMVVSRVKGHKGERGPDGPPGLPGQQGQHGRDGYAGEKGDTGPPGDHE
DAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGDRGQPGAPGCPGNRGPDGRKGRKGDT
IPCNVTYPGRPGPPGFDGPPGPKGLPGHRGAPGLRCLDGQKGQRGKPGISERPGPPGFRG
DIGEPGLGGEKGSSPVGPPGAPGSPGVNGQKGHPGDPAIGYPGLPGKSGLPGAPGSKGLR
GDAGRPGTTGPAGMPGFPGLQGPKGREGNAGFPGIPGLPGHSCERGAPGIPGQPGLPGAP
GSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGWPGADGTPGLPGVPGPTGDDGLPGLPGPK
GPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGYEGEM
DIISKKGETGEPGASGDGGFPGENGDKGHPGMQGRRGEPGSHGPPGFHPGEPGRNGQPGL
PGPPGPPGSPGLRGNIGFPGFPGDQGEPGSPGCPGPSGMDGTRGPKGYKGESASQFGLPG
PKGEPGGPGYPGRLGASGEQGLPGAQGPGGPPGRPGPPGLFGPTGCPGSPGGPGLQGPPG
EVGDPGPRGVLGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASGSHEMGPPGPVGM
PGPKGETGDPGNPGISPPGLFGERGAPGPPGPPGRAGLPGPPGAPGKALKGDIPDTGLPG
DQGPPGPDGPRGVPGPPGPPGSVDLLKGEPGDCGLPGPPGLPGPPGPPGHKGFPGCDGKH
GQKGPMGFPGPQGPPGSPGPPGDKGLPGPPGRRGPLGPPGSRGEPGPPADLDACPRIPGL
PGVPGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGHKGDMGEAGCP
GAPGPPGPMGDPGPIGFGPGYLSGFLLVLHSQTDGEPTCPMGMPRLWTGYSLLYLEGQER
AHNQDLGLAGSCLPIFSTLPFAYCNIHQVCHYARRNDRSYWLASTAPLPMTPLSEDEIRP
YISRCAVCEAPAQAVVVHSQDQSIPPCPRTWRSLWIGYSFLMHTGAGDQGGGQALMSPGS
CLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVRPDLQFSSAPLPDTLKESHAQRQKIS
RCQVCVKHS
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcactggtaaggtgtcctttcaggtgcaacaagctcttggccaccaattcctggtca
ctcatacttattctgttttctgtacaatatgcatatgggggtggaaagaagtttattggt
ctctgtggaggaagagattgctctctttgccagtgctttcctgaaaagggatctcggggt
caaccgggaccaccagggccacagggtcctattggacccctgggaccaccgggacccatt
gggatcccaggagagaaagggatgaaaggtgacagtggccgtcctggagcagcaggtgac
aaaggtgacaagggtccaaccggagttcctggatttccaggtctggatgggatacctggg
cacccagggcctcctggatccagaggcagacctggcatagatggccacaatggctcaaga
ggtgatccagggattccaggagaaagaggagctcttggcccacgaggccccccaggcctt
cctggagaaaaaggagaaaaaggaaattcagtgttcattttaggtgccactaaaggtatg
cagggcgacagaggggacccaggacctcccggctcaccaggatcaaggggagtgagaggc
ccagcaggcccagcggggtacccgggagagcccgggttagcaggacctccaggcccccct
ggcagtccaggtttaaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgaggttggccaacaaggttctccgggacccactctgttggtgcaaccacctgattct
ggtctctataaaggagaaaagggtattaaaggaatgcctggaatgactggacctcctgga
ccaccgggacccaggggagagcctggtattggaagaaaaggagagaaagggattcctggg
tttccaggacctcggggggaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtttggagatcctgggtcatttggatttcttggcccaaagggagat
cctggagaccgagggcacccaggaccaccaggggttttggtaactccatctcttccactc
aaaggccctccaggggatccagggcaccccggccgctatggagaaacaggggctgttgga
ccacgtggtcctcctggtgccccaggtcgaccaggggaagcctgtccaggcatgacggga
cctcctgggccacgagggtttcctggtcatccaggatttccaggggcagctggggttcct
ggaagagctgattctgctccaggaaaaccaggcaaccagggaccaactgggctgcctgga
gtgccgggactgccgggacctccgggatcagatgttgtatattgtactgttgggcaaccc
ggaccacaaggaataaaaggcaaagtgggtcctccaggaagacgaggctccaaaggagaa
aaaggcaactcagggctctgtgcctgccagcctggtcccatgggcccatcaggccctcca
gggcctcctgggaggcaagggagtaagggagacttggggctccctgggtggcttggagaa
aaaggttccccaggccctcctggtgccaaaggatctccagggccaccgggaaaacctggt
gcctcaggactacctggcagcaaaggagacaaaggtgacatggttgtatcaagagtgaaa
ggacacaaaggagaaagagggcctgatgggccccctggacttccagggcagcagggacaa
catggccgagatggatatgctggagaaaagggggacacggggccgcctggtgatcacgag
gatgcagccccaggtgataaagggcctcctggaccgccagggccccctggcagagcggga
cctagggggcccccaggcctgggatttcctggccctccaggagacagagggcaaccagga
gctccaggctgcccaggcaacaggggtcctgatggtcggaagggtcggaaaggtgataca
attccttgtaacgtaacataccctgggaggccaggccctccaggttttgatggtcctcca
ggtccaaagggccttccaggtcatcggggtgctcctgggctgaggtgtttggatggacaa
aagggtcaacgtggcaaaccaggaatctcagaaagacctggtccacctggtttccgtggt
gatataggagaaccaggtttgggaggtgaaaaggggtcctcccctgttgggcccccagga
gctccaggttcacctggagtgaatggtcagaaaggacacccaggagatcctgctatcggc
tacccaggacttccgggaaagagcggacttccaggagcaccagggtccaaaggactcaga
ggcgatgccgggcgtccagggaccacagggccagctggcatgcccggatttccaggtctc
caaggtcccaagggccgagagggaaatgctgggtttccagggatcccaggcctacctggt
cactcctgtgaaagaggtgctccagggataccagggcaaccggggctccccggggctcca
ggcagtccaggtgccccaggttggaaaggacagcgaggggacatgggacctctgggacct
gctggaatgaagggccttcctggagtcccgggatggccgggggcagatggaaccccaggt
cttccaggggtcccaggccccactggagacgatgggctacctggtcttccaggcccaaag
ggaccccaggggctgcctggcttcctgggttttccaggagagagaggaaaacctggtcag
gatggacaccctggcagaaagggagaacacggagagaagggttggcctggcttcctggga
gaccgaggattgaaaggtgtcaaaggagcaagaggacccccgggatatgaaggagaaatg
gatattatttccaagaagggggaaactggagaacctggagcttctggggatggtggattc
ccaggagaaaatggtgataaaggtcatcctgggatgcaaggaaggagaggagagccagga
agccatggaccacctggatttcaccctggggagcctggaagaaatggacagccagggctt
cctggacccccaggccctccaggctcacctgggctgagaggcaacattggttttccagga
tttccgggtgaccagggtgagccaggttctccagggtgcccgggaccttcaggaatggat
ggtaccagaggacctaaaggatacaaaggggaatctgcaagtcagtttggcctacctggt
ccaaagggtgagccaggtggccccggatatccaggacgtttgggagcatctggagagcag
ggcttgcccggtgctcaaggtcctggaggaccacccggaaggccaggacctcctggcttg
tttggaccaacaggatgtccaggtagtccaggggggcctgggctgcagggacccccagga
gaagtgggggatcctggaccaagaggcgtcctgggggacccaggggcaccaggtcttcca
ggaataaaaggtccctctgggtcgcccggcctgaacggcctgcatggtttgaagggtcag
aaaggcagcaaaggcgcttcaggttcgcatgaaatgggccccccaggtccagtgggaatg
cctggccctaaaggggagacaggagaccccgggaacccaggaatttctcctccaggactt
tttggagaaagaggtgccccgggtcccccaggacccccagggcgagctggactgcctggt
cctccaggtgccccaggaaaagctcttaagggtgacattccggacacgggtctgcctgga
gatcaggggcctcctggccccgatggtccaagaggagtacccgggcctccaggaccacct
gggagtgtcgaccttctgaaaggagaaccaggagactgtggtctgccggggcctccaggt
ctcccaggcccaccaggccctccaggacacaagggcttcccaggatgtgatggaaaacat
ggccagaaaggaccaatgggattcccggggccgcaggggccacctggaagtcctgggcca
cctggagacaaaggtttacctggacctccaggcagacgagggcctttgggtcctccgggt
tccagaggtgagcctgggcccccagcagacttggatgcatgcccccgaatcccagggctt
cctggggtaccaggcccgagaggaccggaaggaaccatggggcttcctggcatgagaggc
ccgccgggaccagggtgcaaaggagagcctgggctggatggcaggaggggtgaggatggc
ctcccagggtcccctgggcctccgggacataaaggtgacatgggagaagcaggctgccca
ggagcaccaggccctcctgggcccatgggggatcctgggcccatagggtttggcccggga
tacctcagtggcttcctcctggttctccacagtcagacggatggagaacccacctgcccc
atgggcatgcccaggctctggactgggtatagtttgctatacctggaaggacaggagaga
gctcacaatcaagacctaggtctggcgggctcctgcctgcccatctttagcacgctgccc
ttcgcctactgcaacatccaccaggtgtgccactatgcccggaggaacgacaggtcctac
tggctggcgagcacagcgcctctgcccatgactccactctcggaggatgagatccgcccg
tacatcagccgctgcgcagtgtgcgaggcccccgcccaggccgtggtggtgcacagccaa
gaccagtccatccccccgtgtccgcggacctggaggagcctctggatcgggtactccttc
ctcatgcacacaggcgctggggaccaaggaggcgggcaggccctcatgtccccaggcagc
tgcctagaggatttcagagctgcaccattcctggaatgccaaggccggcagggaacttgc
cacttttttgccaacaagtatagtttctggctgacaacagtgagacctgacttgcagttt
tcctctgcaccgttaccggacaccttgaaagaaagccatgctcaacgccagaaaatcagc
aggtgccaggtctgcgtgaagcatagctaa
DBGET
integrated database retrieval system
