Bacillus licheniformis DSM 13 = ATCC 14580: BLi00125
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Entry
BLi00125 CDS
T00200
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit RpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Pathway
bld03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLi00125 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bld03021
]
BLi00125 (rpoB)
03400 DNA repair and recombination proteins [BR:
bld03400
]
BLi00125 (rpoB)
Enzymes [BR:
bld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLi00125 (rpoB)
Transcription machinery [BR:
bld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLi00125 (rpoB)
DNA repair and recombination proteins [BR:
bld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLi00125 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AAU39099
UniProt:
Q65PB5
LinkDB
All DBs
Position
120755..124336
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGENEYLRNTLDKDNTENTDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGAILDRRTLDKVLPYLENGIGFKKLYPNGGVVEDEVTLQSIKIYAPTDQEGEQT
INVIGNAYIEEGVKNITPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANARLNDDGSFVDDSIVARFRGEN
TVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPESPIVGT
GMEYVSAKDSGAAVICRHPGIVERVEAKNIWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVEKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHLGMAARRLGLHVASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSSDEEEIEMRDLEDDEDAKQNEGLSLPNDEESEELVSADAERDVVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgcacgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcgccaattgaggatttcactggt
aacctctctctggaatttatcgactacagcttgggcgagcctaagtatccggtagaagaa
tcaaaagagcgggatgtgacctattcagctccgctgcgggttaaagtccgcttaatcaac
aaagaaaccggcgaagtaaaggatcaggatgtcttcatgggcgatttccctattatgaca
gacactggaaccttcattatcaacggtgcagaacgggtcatcgtatctcagctcgttcgt
tctccaagtgtatattttagtggtaaagtagacaaaaacggtaagaaaggttttaccgcg
actgtcattccaaaccgtggcgcatggttagaatacgagactgatgcgaaagatgttgtt
tacgtacgcatcgatcgcacacgtaagttgccggttacggttcttttgcgtgctcttggc
ttcggatctgaccaagagatcattgatctcatcggtgaaaacgagtatctgcgcaatacg
cttgataaagataatacggaaaacaccgataaagcgcttcttgaaatctacgagcgtctt
cgtccaggggagccgcctaccgtagaaaacgcaaaaagcctgcttgattcaaggttcttt
gatccgaaaagatatgaccttgcgagtgtaggacgttataaaattaataaaaagcttcac
atcaaaaaccgactttttaatcagcggcttgctgaaacgctagtcgaccctgaaacaggc
gaaatccttgccgaaaaaggagcgattttagacagaagaacgcttgataaagttctgccg
taccttgaaaacggaatcggttttaaaaagctttatccgaacggcggagttgtcgaagac
gaagtaacgcttcagtctatcaaaatctatgctccgacagaccaagaaggggagcagaca
atcaatgtgattggaaatgcttatatcgaagaaggcgttaagaatattacaccttctgat
attatcgcttccatcagctatttctttaacctgcttcacggagtgggcgataccgacgat
atcgaccatctaggaaaccgccgtctccgttcagtgggagagcttctgcaaaaccaattc
cgtattggtttaagcagaatggagcgcgttgttcgtgaaagaatgtctattcaagataca
aacacgatcacgccgcagcagctgatcaatattcgccctgtcatcgcatcaatcaaagag
tttttcggaagctcgcagctttctcagtttatggatcagacgaatccgcttgctgagctg
acgcataagcgccgtctgtcagcgctcggaccgggcggtttgactcgtgagcgcgccgga
atggaagtccgtgacgttcactattcacactacggccggatgtgtccgattgaaacccct
gagggtccaaacatcggcttgatcaactcgctttcttcattcgcgaaagtgaaccgtttc
ggcttcatcgaaacgccgtatcgccgcgtcgatcctgaaactggaaaagtaacgccgaga
atcgattacttgacagctgatgaagaagacaactatgtcgttgcccaggcaaacgcacgc
ctgaatgatgacggttcttttgtggatgacagcatcgtcgcccgtttcagaggggagaac
accgttgttccgaaagaccgcgtcgactatatggacgtttcgcctaaacaggttgtctct
gccgcgactgcatgtattcctttcttggaaaacgatgactcaaaccgcgcccttatggga
gcgaacatgcaacgtcaggccgtacctcttatgcagcctgaatcgccgatcgtcggaacc
gggatggaatatgtatctgcgaaagactccggtgccgctgttatttgccgccaccctgga
atcgttgaacgggtggaagcgaagaacatctgggtgcgccgctatgaagaagtcgacggc
cagaaagtcaaagggaaccttgataaatacagcctgctgaagtttgtccgttccaaccag
ggaacttgctacaaccagcgtccgatcgtaagcgtcggtgatgaggttgaaaaaggtgaa
attttagctgacggtccgtccatggaaaaaggtgagcttgcccttggacgcaacgtcatg
gtcggctttatgacatgggatggctacaactatgaggatgccatcatcatgagcgaacgc
cttgtaaaagacgacgtatacacgtctattcatattgaagaatacgaatcagaggcccgg
gatacaaaactcggacctgaagaaatcactcgcgatattccgaacgtcggtgaggacgct
cttcgcaatctcgatgaacgcggaattatccgtgtcggtgctgaagtaaaagacggagat
cttcttgttggtaaagtaacccctaaaggtgttacagagcttacggcggaagaacgcctg
cttcatgccatcttcggggaaaaagcgcgtgaagtgcgtgatacgtcgctgcgtgtacct
cacggaggcggcggtatcatccttgatgtaaaagtgttcaaccgcgaagacggagacgaa
ctgcctccgggcgttaaccagctcgtccgcgtctacatcgttcagaagcgtaaaatttct
gaaggggacaaaatggccggacgccacggtaacaaaggtgttatttcgaaaattcttccg
gaggaagatatgccgtatctgcctgacggaacgccgattgacatcatgttaaacccgctg
ggcgtaccatcgcgtatgaacatcgggcaggtgttggagctgcaccttggtatggctgca
cgccgcctcggtctgcatgtcgcgtcacctgtatttgacggtgcccgcgaagaagatgtg
tgggaaacccttgaagaagccggcatgtcaagagacgcaaaaaccgtcctttacgacggc
cgaactggggagccgtttgacaaccgggtttctgtcggcatcatgtacatgatcaaactg
gcacacatggttgacgacaaattgcacgcacgttcaaccggtccttactcactcgttacc
cagcagcctctcggaggtaaagcgcagttcggcggacagcgttttggagagatggaagtt
tgggcgcttgaagcttatggtgcagcatatacgctacaagagatcctgactgttaaatcg
gatgatgtcgtaggccgtgtgaaaacatatgaagccatcgtaaaaggcgacaatgttcca
gaacctggtgttccggaatcgttcaaagtattgatcaaagagcttcaaagcttaggtatg
gacgtcaaaattctatcaagcgacgaagaagaaatcgaaatgagagacttggaagacgac
gaagacgcgaaacaaaacgaagggctttctctgccgaatgatgaagagtccgaagagttg
gtttctgctgacgcagaacgcgatgtcgttacaaaagaataa
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integrated database retrieval system
