Bifidobacterium lemurum: BL8807_02410
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Entry
BL8807_02410 CDS
T06861
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
blem
Bifidobacterium lemurum
Pathway
blem02024
Quorum sensing
blem03060
Protein export
blem03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BL8807_02410 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BL8807_02410 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BL8807_02410 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
blem02044
]
BL8807_02410 (ffh)
Enzymes [BR:
blem01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BL8807_02410 (ffh)
Secretion system [BR:
blem02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BL8807_02410 (ffh)
Eukaryotic Sec-SRP protein
BL8807_02410 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
MeaB
AAA_22
cobW
nSTAND3
AAA_31
ArsA_ATPase
AAA_24
Zeta_toxin
APS_kinase
MMR_HSR1
AAA_18
AAA_30
AAA_33
ParBc
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QOL34783
LinkDB
All DBs
Position
621227..622891
Genome browser
AA seq
554 aa
AA seq
DB search
MAAFSSLTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTARIRER
ALGTEVSQALNPAQQVVKIVDEELTEVLGAGVDRPLNFAKNPPTVIMLAGLQGAGKTTLA
GKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGEAVASPG
QTTGDPVKVARDAVALAKQKLYDTVIIDTAGRLGVDEELMKQARDIRDAVQPDEILFVID
AMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFSSTGEGLKDF
EVFHPDRMASRILDMGDIMTLIEQAQRQFDEEEAKKAAAKISEGSFGLDDFLDQLQQVRK
LGSMKSLLGMMPGMAQHRKELEQFDEREIDRTEAIIRSMTPAERRDPKIIDGSRRARIAY
GSGVTVSQVNALLQRFEQAAKMMKRMSNKSGMGGGIPGFGGPAMGGGKKGKGKNKKKGSK
SGNPMKREAEEKALRDRLAGKPSDGASGGSAFAKKPQNPALPAGLDELMGDAAGNGTPDL
PPNLGGGIGGLFGR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttagttctttgactgataggctctcgaatgcgttcaagcatttgaagagc
aagggcaagctttccgaagcggatatcgacggcacgatccgcgagatccgccgcgcactg
ctcgacgccgatgtggcgctcgacgtggtgcgttccttcaccgcgcgcatccgcgagcgc
gcgctgggcaccgaggtgtcgcaggcgctcaatccggcgcagcaggtcgtcaaaatcgtg
gacgaggagctcaccgaagtgctcggcgccggcgtggaccgtccgctgaacttcgcgaag
aatccgccgaccgtcatcatgctcgccggtctgcagggcgccggtaagacgacgctcgcc
ggcaagctgggctactggctcaaggacagcggtcacacgccgctgctggtggcggccgac
ttgcagcgtccgaacgcggtgacgcagctgcaggtggtgggcgagcgcgccggcgtgccg
gtgtacgcgccggagaagggcgtgcagtccgatggcggcgaggcggtggcctcccccggc
cagaccacgggcgatccggtgaaggtggcgcgcgacgcggtcgcgctggccaagcagaag
ctgtatgacacggtgatcatcgataccgccggccgtttgggtgtggacgaggagctgatg
aagcaggcccgcgacatccgcgatgccgtgcagcccgatgagattctgttcgtgatcgac
gcgatgatcggccaggacgcggtgcagaccgcgaaggccttcgacgagggcgtggatttc
accggcgtggtgctttccaagctcgacggcgacgcccgcggcggcgcggccctgtcggtg
gcgagcgtgaccggcaagccgatcctgttctcgtccaccggcgaaggcctcaaggatttc
gaggtgttccacccggaccgcatggcctcgcgcatcctcgacatgggcgacatcatgacc
ctgatcgagcaggcgcagcgccagttcgacgaggaggaggccaagaaggccgccgcgaag
atctccgagggctccttcggcctcgatgacttcctcgaccagctgcagcaggtgcgcaag
ctcggttcgatgaaaagcctgctgggcatgatgccgggcatggcgcagcaccgcaaggag
ctggagcagttcgacgagcgtgagatcgaccgcaccgaggccatcatccgttcgatgacc
ccggccgaacgccgcgacccgaagatcatcgatggctcgcgccgtgcccgcatcgcctat
ggttccggcgtgaccgtctcacaggtgaacgcgctgctgcagcgtttcgagcaggccgcg
aagatgatgaagcggatgagcaacaagtccggtatgggcggcggcatccccggcttcggc
ggcccggcgatgggcggcggcaaaaaaggcaagggcaagaacaagaagaagggttcgaag
tccggcaatccgatgaagcgcgaggccgaggagaaggcgttgcgcgaccgtctggccggt
aagccctccgacggcgcgtccggcggctcagcgttcgccaagaagccgcagaacccggcc
cttcccgccggtttggatgagctgatgggagacgcggccggcaacggcacgcccgacctg
cctccgaatctcggcggcggcatcggcgggctgttcggccgctga
DBGET
integrated database retrieval system
