Bacillus paralicheniformis: BaLi_c01260
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Entry
BaLi_c01260 CDS
T02694
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase RpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
blh
Bacillus paralicheniformis
Pathway
blh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BaLi_c01260 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blh03021
]
BaLi_c01260 (rpoB)
03400 DNA repair and recombination proteins [BR:
blh03400
]
BaLi_c01260 (rpoB)
Enzymes [BR:
blh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BaLi_c01260 (rpoB)
Transcription machinery [BR:
blh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BaLi_c01260 (rpoB)
DNA repair and recombination proteins [BR:
blh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BaLi_c01260 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGN34554
LinkDB
All DBs
Position
120317..123898
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGENEYLRNTLDKDNTENTDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLIDPETG
EILAEKGAILDRRTLDKVLPYLENGIGFKKLYPNGGVVEDEVTLQSIKIYAPTDQEGEQT
INVIGNAYIEEGVKNITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANARLNDDGSFVDDSIVARFRGEN
TVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPESPIVGT
GMEYVSAKDSGAAVICRHPGIVERVEAKNIWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHLGMAARRLGLHVASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSSDEEEIEMRDLEDDEDAKQNEGLSLPNDEESEEFVSADAERDVVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgcacgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcgccaattgaggatttcactggt
aacctctctctggaatttatcgactacagcttgggcgagcctaagtatccggtagaagaa
tcaaaagagcgcgacgtgacctactcagctccgctgcgtgttaaagtccgcttaatcaac
aaagagaccggtgaagtaaaggatcaggatgtcttcatgggtgatttccctattatgaca
gacactggaacctttattatcaacggtgcggaacgggtcattgtatctcagctcgttcgt
tctccaagtgtatattttagtggtaaagtagacaaaaacggtaagaaaggttttaccgcg
actgtcattccaaaccgtggcgcatggttagaatacgagactgatgcgaaagatgttgtt
tatgtacgcatcgatcgcacacgtaagttgccggttacggttcttttgcgtgctcttggc
ttcggatctgaccaagagatcattgatctcatcggtgaaaacgagtatttgcgcaatacg
cttgataaagataatacggaaaacaccgataaagcgcttcttgaaatctacgagcgtctt
cgtccaggagagccgcctacagtagaaaacgcaaaaagcctgcttgattcaaggttcttt
gatccgaaaagatatgaccttgcaagtgtaggacgttataaaattaataaaaagcttcac
atcaaaaacagactgtttaatcagcggcttgctgaaacgctgatcgatcctgaaacaggc
gaaattcttgccgaaaaaggcgcgattttagacagaagaacgcttgacaaagtcctgcct
taccttgaaaacggaatcggttttaaaaagctgtatccgaacggcggagttgttgaagat
gaagtgacgcttcagtctattaaaatctatgccccgacagatcaagaaggggagcagaca
atcaatgtgattggaaatgcttatattgaagaaggcgttaaaaatattacaccttctgat
attatctcttccatcagctatttctttaacctgcttcacggagtgggcgataccgacgat
atcgaccatttaggaaaccgccgtctccgttcagtgggagagcttctgcaaaaccaattc
cgtatcggtttaagcagaatggagcgtgttgttcgtgaaagaatgtctattcaagataca
aacacgatcacgccacagcagctgatcaatattcgccctgtcatcgcatcaatcaaagag
tttttcggaagctcgcagctttctcagtttatggatcagacgaatccgcttgctgagctg
acgcataagcgccgtctgtcagcgctcggaccgggcggtttgacccgtgagcgcgccgga
atggaagtccgtgacgttcactattcccactacggccggatgtgtccgattgaaactcct
gagggtccaaacatcggcttgatcaactcgctttcttcattcgcgaaagtgaaccgtttc
ggcttcatcgaaacgccgtatcgccgcgttgaccctgagactggaaaagtaacgccgaga
atcgattacttgacagctgatgaagaagacaactatgtcgttgcccaggctaacgcacgt
ctgaatgatgacggatcttttgtggatgacagcatcgtcgcccgtttcagaggggagaac
accgttgttccgaaagaccgcgtcgactatatggacgtttcgcctaaacaggttgtctct
gccgcgactgcatgtattcctttcttggaaaacgacgactcaaaccgcgccctaatggga
gcgaacatgcaacggcaggctgtacctcttatgcagcctgaatctccgatcgtcggaacc
ggaatggagtatgtatctgcaaaagactccggtgccgctgttatttgccgccatcctgga
atcgttgaacgggtggaagcgaaaaacatctgggtgcgccgctatgaagaagtcgacggc
cagaaagtcaaaggaaaccttgataaatacagcctgctgaagtttgttcgttccaaccag
ggaacttgctacaaccagcgtccgatcgtaagcgtcggtgatgaggttgtaaaaggtgaa
attttagctgacggtccgtctatggaaaaaggtgagcttgcccttggacgcaacgtcatg
gtcggctttatgacatgggatggctacaactacgaggatgccatcatcatgagcgaacgc
cttgtaaaagacgacgtatacacgtctattcatattgaggaatacgaatcagaggcccgg
gatacaaaactcggacctgaagaaattacacgcgatattccaaacgtcggtgaagacgct
cttcgcaatctcgatgaacgcggaattatccgtgtcggtgctgaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaaaggtgttacagagcttactgcagaagagcgcctg
cttcacgccatcttcggcgaaaaagcgcgtgaagtccgcgatacgtcgctgcgtgtgcct
cacggaggcggcggtatcatccttgatgtaaaagtgttcaaccgcgaagacggagacgaa
ctgcctccgggcgttaaccagctcgtccgcgtttacatcgttcagaaacgtaaaatttct
gaaggggacaaaatggccggacgccacgggaacaaaggtgttatttcgaaaatccttccg
gaggaagatatgccgtatctgcctgacggaacaccgattgacatcatgttaaacccgctg
ggcgtaccatcgcgtatgaacatcgggcaggtgttggagctgcaccttggtatggctgca
cgccgtctcggtctgcatgtcgcgtcgccggtatttgacggtgcccgcgaagaagatgtg
tgggaaacgcttgaagaagccggcatgtcaagggacgcaaagacagtcctttacgacggc
cgaactggagagccgtttgacaaccgggtgtctgtcggcatcatgtacatgatcaaattg
gctcacatggttgacgacaaattgcacgcgcgttctacaggtccttactcactcgttacc
cagcagcctcttggaggtaaagcgcagttcggtggacagcgttttggagagatggaagtt
tgggcgcttgaagcttacggtgcagcatatacacttcaagaaatcctgactgttaaatcg
gatgatgtcgtaggccgtgtgaaaacatacgaagccatcgtaaaaggcgacaatgttcca
gaacctggtgttccggaatcgttcaaagtattgatcaaagagcttcaaagcttaggtatg
gacgtcaaaatcctatcaagcgacgaagaagaaatcgaaatgagagacttggaagacgac
gaagacgcgaaacaaaacgaagggctttctctgccgaatgatgaagagtccgaagaattc
gtttctgctgacgcagagcgcgatgtcgtcacaaaagaataa
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