Bifidobacterium longum subsp. longum JDM301: BLJ_1708
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Entry
BLJ_1708 CDS
T01240
Name
(GenBank) ribonuclease H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
bll
Bifidobacterium longum subsp. longum JDM301
Pathway
bll03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
bll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLJ_1708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bll03032
]
BLJ_1708
Enzymes [BR:
bll01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BLJ_1708
DNA replication proteins [BR:
bll03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
BLJ_1708
Prokaryotic type
Elongation factors (bacterial)
RNase H
BLJ_1708
Elongation factors (archaeal)
BLJ_1708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
COX6B
Motif
Other DBs
NCBI-ProteinID:
ADH01141
UniProt:
D6ZW85
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All DBs
Position
2042390..2043538
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AA seq
382 aa
AA seq
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MLPSLVLYSPLFSFQIPDAPLLPASPAERKCLVFLVSAHLFTRDGMFFQAKSIGVMLFTL
FTTLFCLALGNPTSARDCTACVRVENMTITVSTDGSALGNPNGPMGWAWADHEQNAGGKP
GHKHDDHGYDAGGATNGTNQIGELCAVLEALRAHPGPEPLLIESDSQYAINCSTKWVKGW
KKNGWKNSQKKPVKNKELIQAIDREISQRPGPVDFRWVKGHAGNEGNELVDELARTYAGD
CRSGARDGYLPIEGWQSLLGSEYAHGTDVPPDVQLVLDGKADAASLRKPAAATDSTDATR
PETKSSSPLATQSAQPVQSAHPVHPAKPSGLTVSGTLTFSPAPKTSPYFNGQSMPIKGSI
EIEGYVDGDGNLTITNAPFVRH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgtcactggttttgtacagtcccttattctcattccagataccggatgcgcca
ttgttgccggcctcacccgcagagaggaaatgtcttgtttttcttgtgagcgctcaccta
ttcacgcgcgatggcatgttttttcaagcaaagtcaataggtgtgatgttattcacactc
ttcactacgttgttttgcctcgcactgggcaaccccacttcagcaagagattgcacagct
tgcgttagggtggagaacatgactatcacagtatccacagatgggtccgcattagggaat
ccaaacgggccaatgggctgggcctgggccgatcatgagcagaacgccggcggcaagccc
ggccataagcacgacgaccatggttatgatgcgggcggcgcgaccaacggcaccaatcag
attggtgagctgtgcgcagtgctggaagctttgcgagcgcacccgggccctgagccattg
ctcatcgaatcggattcgcagtacgccatcaattgctcgaccaagtgggtcaaaggctgg
aagaagaacggctggaaaaattcgcagaaaaagcctgtgaagaacaaagagcttattcag
gcgatcgaccgtgagatctcacaacgccctggcccggtggatttccgatgggtcaaaggt
cacgccggcaacgagggcaatgagttggtcgatgaactggcacgcacctatgcgggcgat
tgccgttcgggtgcgcgcgacggctatctgccgattgaaggctggcagtcgctactgggc
tccgaatacgcacatggcaccgatgtgcctccagacgtgcagttggtgctggatggcaag
gcggatgcggcaagtttgcgcaagccggctgcggcgacggattcgacggatgccacaagg
ccagagaccaagtcttcgtcacccttagcgacacaatcagcgcaacctgtacaatcagcg
caccccgtacaccccgcaaagccaagcggactgacggtatccggtacgctgaccttctcc
cccgcgccgaaaacgagcccgtatttcaacgggcagtcgatgccgatcaaaggcagcatc
gaaatcgaaggctatgtggacggcgacggcaacctgaccatcaccaacgcaccattcgta
cgacactaa
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