Salinivirga cyanobacteriivorans: L21SP5_02008
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Entry
L21SP5_02008 CDS
T04172
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq00900
Terpenoid backbone biosynthesis
blq01100
Metabolic pathways
blq01110
Biosynthesis of secondary metabolites
Module
blq_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
L21SP5_02008
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
blq01006
]
L21SP5_02008
Enzymes [BR:
blq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
L21SP5_02008
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
L21SP5_02008
2.5.1.29 geranylgeranyl diphosphate synthase
L21SP5_02008
Prenyltransferases [BR:
blq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
L21SP5_02008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SbsC_C
DUF4211
Motif
Other DBs
NCBI-ProteinID:
ALO15647
UniProt:
A0A0S2HZZ8
LinkDB
All DBs
Position
complement(2420092..2421066)
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AA seq
324 aa
AA seq
DB search
MHSFEELQEIFNNEIDRYSPAVEPENLQKPVVYTLGMGGKRIRPVLLLMAAETFGGKYQD
AIPAAMAIEIFHNSTLIHDDIMDEAELRRNQTTVHKQWNLNSAILSGDLMIIKAYEQLNQ
LNSNKINQVLTVFNKIAAEVCEGQQFDLDFETDDEVSLSDYKKMIRLKTSVLLAGSLKIG
AIVGGADTDNAKKLYCFGENLGLAFQLQDDYLDAFGNTKSFGKKIGGDIAANKKTFLLLK
ALELAKGAYHDELTSLLGNNSISESEKIESVLAIYEKLGIKSLTEDEMKKHFEKAIEYLE
EIDIDEKYKDGLYELSKKLMGRQT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtttcgaagaattacaggaaatattcaataatgaaattgaccgctatagtccg
gcagtagagcccgaaaatttgcaaaaacctgtagtttatacacttggaatgggcggaaaa
cgaattcgacccgttttattgcttatggccgcagaaacatttggtggcaaatatcaggat
gccataccggcagccatggctattgaaatatttcacaattccacgcttatccatgatgat
ataatggatgaagctgaactgcgacgtaatcagactaccgttcataaacaatggaattta
aactctgcaatactgagtggagacctaatgattataaaagcatatgagcaattaaatcag
ctaaatagcaataaaataaatcaggttttaactgtttttaataaaatcgctgcagaagtt
tgcgaagggcagcagtttgatctggattttgaaactgacgatgaggtaagcctttcagat
tataaaaaaatgatacgcctgaaaacttcagttttacttgccggatcgctcaaaattggc
gccattgtcggtggagctgatacagataatgcaaaaaaattgtactgctttggtgagaac
ctggggctggcatttcagttacaggacgattatttagatgcctttggcaatactaaatca
tttggaaagaagatcggaggcgacatagcagccaacaaaaaaacctttttgctgctcaaa
gccctggaacttgcaaaaggagcttatcatgacgagcttacttcgctgcttggaaataat
agtatttcagaatctgaaaaaattgaaagtgtgcttgctatatacgaaaagcttggtata
aaatcattgacagaagatgaaatgaaaaagcacttcgaaaaagcaattgaatatttggaa
gagattgacatagacgaaaagtataaagacggcctttatgagttgtccaaaaaattaatg
ggtcgtcaaacatag
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