Burkholderia mallei 6: DM78_4003
Help
Entry
DM78_4003 CDS
T03489
Name
(GenBank) xylose isomerase-like TIM barrel family protein
KO
K26400
3-dehydroshikimate dehydratase [EC:
4.2.1.118
]
Organism
bmae
Burkholderia mallei 6
Pathway
bmae00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bmae01100
Metabolic pathways
bmae01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bmae00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
DM78_4003
Enzymes [BR:
bmae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.118 3-dehydroshikimate dehydratase
DM78_4003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Glyoxalase_5
Glyoxalase_4
Glyoxalase
DUF8048
Motif
Other DBs
NCBI-ProteinID:
AIO55609
LinkDB
All DBs
Position
2:1028683..1030746
Genome browser
AA seq
687 aa
AA seq
DB search
MQRSIATVSLSGTLVEKLRAIRAAGFDGVEIFENDLLYFDGSPADVRAIAADLGLAIVLF
QPFRDFEGVPPERLARNLERAKRKFELMHALGANRMLVCSNMSPDAIGDDALLIDQLGAL
ARAAQAAGVVAAYEALAWGRNVKTYGHAWRLVDAVNHPSLGLALDSFHTLSLGDSPDGIA
RIPGERIAFVQIADAPKLAMDVLEWSRHYRSFPGQGDFDLAGFTARVIESGYAGPLSLEI
FNDGFRAAPTALTAADGYRSLLYLEETTRERLACDARRARRAGGAPGTGETRGERERHGA
PGAHGERGEHRAHDKDDKPDDKRGGPDERESRAAHPRPAPPLFAPPPAPAHVGFQFIEFA
VDAAAAENVAGWLGKLRFRRAGRHRSKDVTLYQHGAASIVLNAERDSFADAFFQEHGLSL
CASAFRVDDARLAFERAAGYGYAPFSGRVGPNERVLPSVRAPDGSLNYFVDEAPGAPTLY
ESDFVLTDIDGPSEVGPLAGIDHVCLALPADALDTWVLFFKTAFGFEAERNWLVPDPYGL
VRSRAVRSPDGSVRIALNASVDRHTAVVRSLERYRGTGLNHVAFRADDIVAAIAEFAADG
VPFLRIPRNYYDDLAARYALPDETIDTLRRHHLLYDRDDAGGEFLHAYTELVDGRFSFEI
VERRGGYDGYGAANAAVRLAAQAQRRG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcgatcgccaccgtctcgctatcgggcacgctcgtcgagaagctccgcgcg
attcgcgccgccggcttcgacggcgtcgagatcttcgagaacgacttgctctacttcgac
ggctcgcccgccgacgtgcgcgccatcgccgctgatctcggcctcgccatcgtgctgttc
cagccgtttcgcgatttcgagggcgtgccgcccgagcgcctcgcgcgcaatctcgagcgc
gcgaagcgcaagttcgagctgatgcacgcgctcggcgcgaaccgcatgctcgtgtgcagc
aacatgtcgccggacgcgatcggcgacgacgcactgctcatcgaccagttgggcgcgctc
gcgcgcgccgcgcaggcggcgggcgtcgtcgccgcgtacgaggcgctggcatggggtcgg
aacgtgaagacttatggccatgcgtggcggctcgtcgacgcggtgaaccatccgagcctc
gggcttgcgctcgacagcttccatacgctgtcgctcggcgattcgccggacggcatcgcg
cgcattcccggcgagcggatcgcgttcgtgcagatcgccgacgcgccgaagctcgcgatg
gacgtgctcgaatggagccggcattaccggtcgtttccgggccagggcgatttcgacctc
gcgggattcaccgcgcgcgtgatcgaatcgggctacgccgggccgctgtcgctcgagatc
ttcaacgacggctttcgcgctgcgccgaccgcgctgacggccgcggacggctaccggtcg
ctgctgtatctcgaggagaccacgcgcgagcggctcgcgtgcgacgcgcggcgcgcacgt
cgggcgggcggcgcgccgggaacgggcgaaacgcgcggcgagcgcgaaagacacggcgcg
cccggcgcgcacggcgaacgtggcgaacaccgcgcacacgataaggacgacaagccagac
gacaagcgcggcggccccgacgaacgcgaaagccgcgcggcgcacccgcgccccgcgccg
ccgctcttcgcgccgccgcccgcgcccgcgcacgtcggctttcagttcatcgaattcgcg
gtcgacgcggccgccgccgagaacgtcgccggctggctcggcaagctgcgctttcggcgc
gcgggccgtcaccgctcgaaggacgtgacgctgtatcagcacggcgcggcgtcgatcgtg
ttgaacgccgagcgcgattcgttcgccgacgcgttcttccaggagcacggcctgtcgctg
tgcgcgtcggcgtttcgcgtcgacgatgcgcgtctcgcgttcgagcgcgcggcgggctac
ggctacgcgccgttctcgggccgcgtcggcccgaacgagcgcgtgctgccgagcgtgcgc
gcgcccgacggcagcctgaactacttcgtcgacgaggcgcccggcgcgccgacgctgtac
gaatcggatttcgtgctgaccgacatcgacgggccaagcgaagtcggcccgctcgccggc
atcgatcacgtgtgcctcgcgctgcccgccgacgcgctcgatacgtgggtgctgttcttc
aagaccgcgttcggcttcgaggccgagcgcaactggctcgtgccggacccgtacgggctc
gtgcgcagccgcgcggtgcgcagcccggacggctcggtgcgcatcgcgctcaatgcgtcg
gtggaccggcatacggccgtcgtccggtcgctcgagcgctatcgcggcacggggctcaat
catgtcgcgttccgcgcggacgacatcgtcgcggcgatcgccgaattcgccgcggacggc
gtgccgttcctgcggattccgcgcaattactacgacgatctcgccgcacgctacgcgctg
cccgacgagacgatcgacacgctgcgccgccatcacctgctgtacgaccgcgacgacgcg
ggcggcgaattcctgcatgcgtacaccgagctcgtcgacggccgcttctcgttcgagatc
gtcgagcggcgcggcggctacgacggatacggcgcggcgaacgcagccgtgcggctcgcc
gcgcaggcgcagcgcagggggtaa
DBGET
integrated database retrieval system
