Bombyx mandarina (wild silkworm): 114251437
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Entry
114251437 CDS
T05882
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bman03016
]
114251437
Enzymes [BR:
bman01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
114251437
Transfer RNA biogenesis [BR:
bman03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
114251437
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
114251437
NCBI-ProteinID:
XP_028041493
UniProt:
A0A6J2KIW5
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MTTLQSENCQTNDLNDLFPMSIESLRFPLDNSIQIIFTGYYNGYNVEVRSPEEITLLYHM
GCFGKGSASRSRPALVNSDRYPEIIRKRQYLQRNNWYKKFGDSGCTLVSSTLLKELDELT
AKIVSDGEKLKKKDIIDLVSSDEEFSHDDVDTENAVNQSFSTSEKDEITVVIPNSDSEEE
NYFAALKPQCCVNKIKMQEKLILTPEEAFFLAYGLGSLQVVYNNNILDLEQCWTLLCSND
RHFVDRYVVYHYFRSKGYVVKPGIKFGGDFLLYKDGPGIRHADYIIVIKSDTKQDDLITI
LGHVRVATTTVKEILLVEVLKPNGVTSKLPESLHLYHVKEVLLTRNIPMTINNDD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgactactttacaatcagaaaattgtcaaactaatgacttaaatgacttatttccgatg
tctattgaatcgttgcggtttccattagataactcgatacaaattatatttactgggtac
tacaatggttacaatgttgaagtgaggtcacctgaagaaattactcttttgtatcacatg
ggctgttttgggaagggatctgcctcgaggtcacgacccgcacttgtaaacagtgatcgt
tatccagaaataataaggaaaaggcaatatttacaaaggaacaattggtacaaaaaattt
ggtgatagtggatgtacactggtttcaagtactcttttgaaagaattagatgagttgacg
gccaaaattgtcagtgatggtgaaaagttaaagaaaaaagacataatagatctagtatcc
agcgatgaagagtttagtcatgatgatgtagacacagagaatgctgtcaatcaatctttt
tctactagcgaaaaagatgaaattacagtagtaatacctaatagtgattctgaagaagaa
aattattttgcggcactaaagccacaatgctgtgtaaataaaattaaaatgcaagaaaaa
ttaatattaactccagaagaagcattcttcttagcttatggacttggaagtttacaagta
gtatacaataataatattttagatttagaacagtgttggacattactttgttctaatgat
agacattttgtggacagatatgtagtttatcattattttagatcaaaaggatatgttgtg
aaaccagggatcaagtttggaggagactttttactgtacaaagatggccctggcataaga
catgcagactatatcattgttataaagtctgatacaaaacaagacgacttaattactatt
ctcggtcatgtaagagtagccacaactactgttaaggaaatattgttggttgaagttttg
aaacctaatggagtaacctcgaaactaccagaaagtctacatttataccatgttaaggag
gtattattgacacgaaacattccaatgacaataaataatgatgattaa
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