Bacillus mojavensis: HC660_40240
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Entry
HC660_40240 CDS
T07122
Symbol
trmF
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bmoj
Bacillus mojavensis
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmoj03016
]
HC660_40240 (trmF)
03036 Chromosome and associated proteins [BR:
bmoj03036
]
HC660_40240 (trmF)
Transfer RNA biogenesis [BR:
bmoj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HC660_40240 (trmF)
Prokaryotic type
HC660_40240 (trmF)
Chromosome and associated proteins [BR:
bmoj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HC660_40240 (trmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_binding_2
Pyr_redox_2
FAD_oxidored
DAO
Pyr_redox_3
HI0933_like
AlaDh_PNT_C
Thi4
TraT
Phage_HCP1
Motif
Other DBs
NCBI-ProteinID:
QJC98467
UniProt:
A0ABX6M300
LinkDB
All DBs
Position
complement(4024906..4026792)
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AA seq
628 aa
AA seq
DB search
MGYEAGQYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIV
VREIDALGGEMGRNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKNTLEKEPNLT
LLQGIVERLIVEDGECRGVITQTGAHYRAKAVVMTTGTYLRGRIILGDLSYSSGPNNQQP
SIKLSEHLEELGFDLVRFKTGTPPRVKSDTIDYSKTEIQPGDEVPRAFSYETVEYITDQL
PCWLTYTSPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPE
GRNTQEVYVQGLSTSLPEDVQQRMLATIPGLENVQMMRAGYAIEYDAIVPTQLWPTLETK
KITNLYTAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTK
GTNEPYRLLTSRAEYRLLLRHDNADLRLTEIGHRIGLISDERFAAFEKKKAAIEAEKKRL
HSVIIKPSPENQEYIRSLGGSELKDGVRGTDLMKRPEMNYETVTKLAPPEVSVPQEVAEQ
VEIQVKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKNVRPLSVAQA
SRISGVNPADISILLVYLEQGRIAKIAE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggggtatgaagcaggccaatacgatgtgattgtgattggcgccgggcatgccggtgtt
gaggctgccctcgcatcagcacgccaaggcgccaaaacgcttgtcttgaccatcaactta
gatatggttgcgtttatgccatgtaatccgtctgtcggcggccctgcaaaagggattgtc
gtccgcgaaattgacgcgcttggcggagaaatgggcagaaacatcgataaaacgcatatt
caaatgagaatgctgaatactggaaaaggtcctgcggtccgtgcattgcgtgcccaagca
gacaaattccaatatcagcacgaaatgaaaaatacgcttgaaaaagaaccaaacttaacg
ctgctgcaaggaattgtggagcggctgatcgtagaagacggcgagtgccgcggtgtcatt
acacaaaccggtgcgcattaccgcgcgaaagctgttgtcatgacgactggaacatatttg
agagggcgtatcattctcggtgatctttcttactcaagcggtccgaacaaccagcagcct
tctattaagctttctgagcatttggaagaactgggcttcgacctggttcgttttaaaaca
ggtacgccgcctcgcgtcaaaagcgacacgattgattacagcaaaacggaaattcagcct
ggtgacgaagtgcctcgcgctttctcatatgaaacggttgaatatatcacagatcagctt
ccttgctggctgacatatacgagccctgagacacatgaaattatcgacagcaacctgcac
cgttcaccgatgtattccggtatgatcaaaggtacaggtccgagatactgcccatcaatt
gaagataaagttgttcgttttaatgataaaccgcgtcatcaaattttccttgagccagaa
ggcagaaatacgcaggaagtttatgttcaaggtttgtctactagtcttccagaggacgtg
cagcaaagaatgcttgcaacgattccgggtctggaaaacgttcaaatgatgagagccggc
tatgcgattgagtacgacgcgattgtaccgactcagctatggccgacgcttgaaacgaaa
aaaattacaaatctctacactgccggccaaattaatggaacatccggttatgaagaagcc
gcgggacaaggcattatggcgggaatcaatgcagggcgaaaagcgcttggaaaagaagaa
gtgattctaagccgttctgacgcctacattggtgttctcattgatgaccttgtgacaaaa
ggaacaaatgagccataccgtcttttgacatctcgtgctgaatacagattgcttcttcgc
catgacaatgcagatctgcgtctgacagaaatcggccaccgtatcggattaatttctgat
gagcgatttgcggcttttgaaaagaaaaaagcggccatcgaagcggagaaaaaacgtctg
cattctgtgattatcaagccgtctccagaaaatcaagaatatatccgttctcttggcgga
agcgaattgaaagatggagtacgcggcacagacttgatgaaacgtcctgaaatgaactat
gaaactgtgactaaacttgcaccgccagaagtatcggttccgcaagaagtggcagaacaa
gtagaaattcaagtgaaatatgaagggtatattgaaaaatcccttcagcaggtggaaaaa
ctgaagaagatggaaaacaaaaaaatccctgatcgaattgattatgatgcaattaaaggg
attgcaactgaggctcgtcaaaagctgaaaaacgtacggcctttgtctgttgcccaagct
tcccgtatttccggtgtgaacccggcagacatttcaattctattggtatatttagagcag
ggccgcattgcgaagatagccgagtag
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