Bombyx mori (domestic silkworm): 100141462
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Entry
100141462 CDS
T02817
Symbol
Pm-scl
Name
(RefSeq) PM-Scl autoantigen-like protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100141462 (Pm-scl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
100141462 (Pm-scl)
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100141462 (Pm-scl)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-GeneID:
100141462
NCBI-ProteinID:
NP_001108472
UniProt:
Q8T0Z8
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All DBs
Position
1:6231088..6244013
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AA seq
451 aa
AA seq
DB search
MGSTIFIGAKNIPRPQLTFKDTIDNSENLWVPKISDKPNNIKPLALNILYTEKGEASKFD
YRGTTSIHNDVIIKTIIKICNRYEHPYQMELDMYNPPSQFIDPDPEPPMFPPPLEETKFT
YIDIESKLDELVEHLMAVEQIAVDVEHHSYRDLSGLYLILGITCLIQISTDEGGDFIIDA
LAVREHIHKLNVVFTDPKKLKVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALS
LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQ
TNMLLSVFEDSRQTCASTYNKEVIHDESHIPLYIRSKKNFDNQQMAALKMLYKWRDSQAR
QLDESTTYLLPNHMLLSLSENLPRELQGVNACCDPMPPFVKQNVITIHRMILSVSFLISI
KKLVASYVINAIRLKFNDRYFYIGRTLKCCL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaactatattcatcggagctaaaaacattccgcgtccacagcttactttcaag
gatacaattgataattctgagaatttgtgggtgcccaaaatttcagacaaaccaaacaac
atcaagcctttggctttaaacattttgtataccgagaagggcgaagcttcgaaattcgac
taccgggggaccactagtatacacaatgatgtaatcattaaaacgataataaaaatttgt
aacagatatgagcatccataccaaatggagttggacatgtataaccctccgtcgcagttc
atcgatcccgatccggagcctcccatgtttccaccccctctggaggaaacgaaattcact
tacatagatatagaatcgaagctagacgagttggttgaacaccttatggccgtcgaacaa
attgctgtagatgtagaacatcattcctatagggacctatcaggtttatatttaatttta
ggcataacgtgcctcattcaaatatcaactgatgaaggaggagactttatcattgacgct
ctcgctgtaagggaacacatacataaactgaatgtcgtcttcactgaccccaagaaacta
aaggtgttccacggtgccgatagcgatgttctttggcttcaacgtgatttcggcgtgtat
ttggtgggtcttttcgacacataccacgcagccaagtcactaggtctgcccgcgctttcg
ctcaaatttcttttgatgaagtattgcggcgttgacaccgataaaacgtatcgtctggcg
gactggcgcattcgtccgcttccggacgtgttgatcaagtacgctcgcatggatacgcac
tatcttttgtacgtttggcgcgttatgaagaatcaaataatcgagaagaatgctggacaa
acgaatatgctactgtcggtcttcgaggacagccgtcagacttgcgcctctacatacaat
aaagaggtgattcacgacgagagccacataccattatacatacgttcgaagaagaatttc
gataatcagcaaatggcggctcttaagatgctctacaaatggagagactcgcaggcgcgg
caactggacgaaagcaccacgtaccttctgccgaaccacatgctgctgtcgctctccgag
aatctgccgcgcgagctacaaggcgtcaacgcttgctgcgatccgatgccgccattcgtc
aaacagaatgtgataaccatccatcgtatgatcttatcggtcagttttttaatctccata
aaaaaattggtggctagctacgtgataaacgctattcgtttaaaatttaacgatagatat
ttctatataggacgaacgttgaaatgttgcttgtga
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