Bombyx mori (domestic silkworm): 101736699
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Entry
101736699 CDS
T02817
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101736699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101736699
Enzymes [BR:
bmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
101736699
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101736699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_10
MMR_HSR1
nSTAND3
CbiA
ATP_bind_1
RsgA_GTPase
AAA_22
AAA_29
AAA_24
RIH_assoc
Motif
Other DBs
NCBI-GeneID:
101736699
NCBI-ProteinID:
XP_004923397
UniProt:
A0A8R1WFD4
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All DBs
Position
25:1940322..1947413
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AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLDPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCTIELRGKTEVSYVAKETPMIVYLNVHAALEQQRVAAEQENTRGPVTMIVGPADV
GKSTLSRILLNYAVRMGRRPIYVDLDVGQGQISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHTSPSDNIELYNTIVSRLAEVITEKCETNKKAASSGVIINTCGWIKNAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSGTQRAEARDARIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEDALTRLVAVWGGRALQHRL
LAVSFAAEPDDHVLHSNLAGFVCVTAVDMERQTLTVLSPQPRPLPNTILLLSELQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtgcaactacaagaatttaagcttgaccccgattcggaattacgttttgaa
gtagaatcgaagaacgaaaaagtcgtcttagaggtaaaaagtggatatgctgaattattc
ggtacagaactggtgaaaggaaagccatacgaatttcacacaggagctaaagttgctgtg
tttacttggcacggatgtactatagaactcagaggaaagactgaagtcagctatgtagcc
aaagaaacaccgatgatagtgtacttgaacgtacatgcggcattagaacagcaaagagtt
gcagcagaacaagagaacacaagaggtccggtaacaatgatagttgggcctgcagatgtt
ggcaagtccacactctcaaggatccttttgaactatgctgtccgcatgggcaggaggcct
atttatgttgatttggatgtgggacagggccagattagcgttcctggtacaatcggtgca
ttgttagtagagcgccctgcgtctatagaagaaggcttcagtcagcaggctccgttggtt
tatcattttggtcacacttcgccgagcgataatattgagttatacaacaccattgtgtcg
aggctagccgaagtgatcacagagaaatgcgaaacgaataaaaaagcggcgtcttcgggc
gtcataataaacacgtgtggatggattaagaatgctggttacaaggttttaactcatgcc
gctcaagcatttgaggttgacgtcatattagttttagacaatgagagattgtacaacgag
ctgaagcgtgacatgcctaaatttgtgaaagtagtctatctacctaaaagtggtggggtg
gtggagcgctccggcacgcagagggcggaggcccgggacgcgcgcatccgggagtacttc
tacgggaagagaacaccatactacccgcattcctttgatgttaaattctcagatctcaag
atatacaaggtgggcgcgccgtcgctgccggactcgtgcatgccgctggggatgcgcgcg
gaggacgcgctgacgcggctggtggcggtgtgggggggccgcgcgctgcagcaccgcctg
ctcgccgtgtccttcgcggcggagcccgacgaccacgtgctgcactccaacctcgcgggg
ttcgtctgtgtaacggcagtcgacatggagcgacagactttgacggtcctgtccccgcag
ccgcgccctctgcccaacacgatcctgttgttatcagaactacaatacatggacaatcat
tag
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