Balaenoptera musculus (blue whale): 118880756
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Entry
118880756 CDS
T09887
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03082
ATP-dependent chromatin remodeling
bmus05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118880756 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
118880756 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmus03036
]
118880756 (SS18L1)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118880756 (SS18L1)
GBAF(ncBAF) complex
118880756 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
118880756
NCBI-ProteinID:
XP_036680546
UniProt:
A0A8B8V6T4
LinkDB
All DBs
Position
15:complement(1582173..1610762)
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQSLALGPGGLSQSGSGQGLHSQGSLSDAIGAGLPPSSLMQ
AQIGNGPNHVTLQQTAQSTLPTTSMSMSGSGHGSGPGYSHSGPASQSIPLQGQGAISSYV
SRANINMQSNPVSMMHQQAASSHYSAAQGGSQHYQGQSMAMMGQSGQAGSMMGQRPMAPY
RPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPMSQQYYPDGHGDYAYQPASYTEQSYDRS
FEESTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcccggccgagaggcaaaggggaggtcacgcagcaaacc
atccagaagatgctggacgagaaccaccacctgatccagtgcatcctggactaccagagc
aagggcaagacggccgagtgcacccagtaccagcagatcctgcaccggaacctggtctac
ctggccacgatcgccgattctaaccagaacatgcagtccctgctgcccgccccgccaacc
cagagcctggcgctgggccccggagggctgtcccagagcggctcgggccagggcctgcac
tcgcagggcagcctcagcgacgccatcggcgcgggcctgccgccatcctccctcatgcag
gcccagatcggcaacggtccgaaccacgtgaccctgcagcagacggcgcagagcacgctg
cccaccacctccatgagcatgtccggcagcggccacggctcggggcccggctacagccac
tcgggaccggcctcgcagagcatcccgctgcagggccagggcgccatcagcagctacgtg
tcccgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcgtcccactacagcgcggcacagggcgggagccagcactaccagggccagtccatggcc
atgatgggccagagcgggcaggcgggcagcatgatggggcagcggcccatggcgccctac
cggccctcccagcaaggctcgtcccagcagtacctgggccaggaggagtactacggcggc
gagcagtacggccacggccaggccgcctcggagcccatgagccagcagtactaccctgac
ggacatggcgattatgcctaccagccggcgtcctacacggagcagagctacgaccggtcg
tttgaggagtccacgcagcactactacgagggcggaaactcacagtacagccagcagcag
gcggggtaccagcagggcacagcccagcagcagacgtactcccagcagcagtaccccaac
cagcagagctaccccgggcagcagcaaggctatgggcctgcccagggcgccccctcgcag
tactccagctaccagcagggacaaggccagcagtacggaagctaccgagcgtctcagacg
ggcccgtccgcccagcagcagcggccttacggctacgagcagggccagtacggaaattac
cagcagtaa
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