Balaenoptera musculus (blue whale): 118881211
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Entry
118881211 CDS
T09887
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04512
ECM-receptor interaction
bmus04514
Cell adhesion molecule (CAM) interaction
bmus04820
Cytoskeleton in muscle cells
bmus05205
Proteoglycans in cancer
bmus05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118881211 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
118881211 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118881211 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118881211 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
118881211 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bmus00535
]
118881211 (SDC4)
Proteoglycans [BR:
bmus00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118881211 (SDC4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
118881211
NCBI-ProteinID:
XP_036681761
UniProt:
A0A8B8VA87
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Position
15:15265680..15285370
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AA seq
201 aa
AA seq
DB search
MAPARLLALLWPLVGAVAVAAESIRETEVIDPRDLLEGRHFSGDLPDDEDVGVPEQEPHD
FELSGSGDLDDSEDTPIFPEVIHPLVPLDNHIPEKTGLGSWVPTEPEELEENEVIPKRMS
PFDGDEDVSNKVSMSSTAQGSNIFERTEVLAALIVGGGVGILFAIFLVLLLVYRMKKKDE
GSYDLGKKPIYKKAPTNEFYA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcccgcctgctcgcgctactgtggcccctcgtgggcgccgttgccgtcgcc
gccgagtcgatccgagaaactgaggtcatcgaccctcgagacctcctagaaggccgacac
ttttccggagacttaccggacgacgaggatgttggggtacctgagcaggagccccatgac
tttgagctgtctggctctggagatctggatgactcggaggacaccccgatcttcccggaa
gtgatccatcccttggtgcctctagataaccacatccctgagaagacagggcttgggagc
tgggtccccaccgaacccgaggaactggaggagaatgaggtcatccccaagaggatgtca
ccctttgatggggacgaggatgtatccaacaaggtgtccatgtccagcacagcccagggc
agcaacatctttgagaggacagaggttctggcagctctgattgtgggcggtggcgtgggc
atcctctttgccattttcctggtcctgctgctggtgtaccgcatgaagaagaaggatgag
ggcagctacgacctgggcaagaaacctatctacaaaaaagcccccaccaacgagttctac
gcctga
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