Balaenoptera musculus (blue whale): 118892787
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Entry
118892787 CDS
T09887
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118892787 (YBX1)
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118892787 (YBX1)
03041 Spliceosome [BR:
bmus03041
]
118892787 (YBX1)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
118892787 (YBX1)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118892787 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
118892787 (YBX1)
Spliceosome [BR:
bmus03041
]
Common components
Common spliceosomal components
General mRNP proteins
118892787 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
118892787
NCBI-ProteinID:
XP_036703616
UniProt:
A0A8B8X298
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All DBs
Position
1:34846602..34865195
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AA seq
372 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVL
GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA
EAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEG
QAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRG
YRPRFRRCLRGALLAKDSPERTAMKKIRKIKEMRPKVSSHLNVGTAATSITDADAQKTLN
HKMAKRQKQPIHQLRIRPLPRLSRAGLSKCRLTISTIIRFSHPTRRNEYEIPAIRNEQKI
GAEDLKCLLFAC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcgctgccgacaccaagcccggcacgacgggcagcggcgcagggagcggcggcccgggt
ggcctcacatcggcggcgcctgccggcggggacaagaaggtcatcgcaacgaaggttttg
ggaacagtaaaatggttcaatgtaagaaacggatatggtttcatcaacaggaatgacacc
aaggaagatgtatttgtacaccagactgccataaagaagaataaccccaggaagtacctt
cgcagtgtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcg
gaggcagcaaatgttacaggccctggtggagttccagtacaaggcagtaaatacgcagca
gaccgtaaccattatagacgctatccacgtcgcaggggtcctccacgcaattaccagcag
aattaccagaatagtgagagtggggaaaagaatgagggatcggagagtgctcctgaaggc
caggcccaacagcgccggccctaccgcaggcgaaggttcccaccttactacatgcggaga
ccctacgggcgtcgaccacagtattccaaccctcctgtgcagggagaagtgatggagggt
gctgacaaccagggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggt
tatagaccacgattccgcagatgcctaagaggggccctcctcgccaaagacagcccagag
aggacggcaatgaagaagataaggaaaatcaaggagatgagacccaaggtcagcagccac
ctcaacgtcggtaccgccgcaacttcaattaccgacgcagacgcccagaaaaccctaaac
cacaagatggcaaagagacaaaagcagccgatccaccagctgagaattcgtccgctcccg
aggctgagcagggcggggctgagtaaatgccggcttaccatctctaccatcatccggttt
agtcatccaacaagaagaaatgaatacgaaattccagcaataagaaatgaacaaaagatt
ggagctgaagaccttaagtgcttgctttttgcctgttga
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