Balaenoptera musculus (blue whale): 118893885
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Entry
118893885 CDS
T09887
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04151
PI3K-Akt signaling pathway
bmus04510
Focal adhesion
bmus04512
ECM-receptor interaction
bmus04518
Integrin signaling
bmus04820
Cytoskeleton in muscle cells
bmus04974
Protein digestion and absorption
bmus05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118893885 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118893885 (COL6A6)
04518 Integrin signaling
118893885 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118893885 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118893885 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118893885 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118893885 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmus04147
]
118893885 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
bmus00536
]
118893885 (COL6A6)
Exosome [BR:
bmus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118893885 (COL6A6)
Glycosaminoglycan binding proteins [BR:
bmus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118893885 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
118893885 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
118893885
NCBI-ProteinID:
XP_036705411
UniProt:
A0A8B8X7B9
LinkDB
All DBs
Position
4:11622477..11796621
Genome browser
AA seq
2296 aa
AA seq
DB search
MDFSPRFQVGDFSGYNMKMLLTLLLMIICSHVSVNQNSGPEYADVVFLVDSSDHVGIKSF
PFVKTFINKVITSLPIEAHKYRVGLAQYSDGLHGEFQLSTFKSRGPMLNHLKKNFMFLGG
SLRIGNALREVHTTYFSNGRDRRQFPPILVVLASAESEDAVEEASEVLHNKGVRIISVGM
QGASEETLKAMATGQFHYSLRTVRDLSTFSQNMTQILKDAAQYKEGAVNDILVEVCQGPS
VADVVFLLDMSVNGSWEDFDYLKEFLEGSVSALDIKENCMRVGLVAYSNETKVIHALSSG
INKSEILQDIQNLSPQVGKAYTGAALRKIRKEVFSVQHGSRKNQGVPQIAVLVTHSPSED
NVTKAAVNLRRQGVTIFTMGIEGASDAQLEKIASHPAEQYVSKLKTFSDLAAHNQTFLKK
LRNHITHTVSVISERTETLKSGCVDTEEADIYLLIDGSGNTQATDFQEMKTFLSEVVGMF
NIAPQKVRVGAVQYADRWDLEFEINKYTNKHDVGKAIENIRQLGGNTNTGAALNFTLGLL
QKAKRQRENRVPCHLVVLTNGVSQDSILGPANRLREELIHVYAIGVKEANKTQLREIAGE
EKRVYYVHDFDALKDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMK
NLVSKSQIGADRVQIGVVQFSDINKEEFQLNRYMSQGEISDAIDRMAHIGETTLTGSALT
FVSQYFSPAKGARPNVRKFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLE
EISGRPEMVFYVKNFDILQHIEDDLVFGICSPREECKRIEVLDIVFVIDNSGSIDHDEYN
IMKDFMIDLVKKADVDKNHVRFGALKYADDPEVLFYLDKLGTKWEVISELQNDQPMGGNT
YTAKALGFSDHMFTEARGSRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAV
GIAGANPMELLAMAGSSDKYFFVETFGSLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMD
GSNSIHPDDFKKMKKFLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQ
IENIQQIFGNTYIGSALRQVGHYFQPDMGSRINTGTPQVLLVLTDGQSQDEVAQAAEELR
HKGINIYSVGIGDVDDQQLVQITGTADKKLTVHNFDELKKVKKRIVRNICTSGGESNCFV
DIVVGFDISTQQNGQTLLEGQPWMETYLPDILRAISSLSGVSCEVGTETQVSVAFQVTNA
MEKYSPKFEIYSENILDSLKDVTVKRPSLLNTNLLSSLWGAFQNKSAARGKVVLLFSDGL
DDDVEKLEQKSDELRKEGLNALITVALDGATNSNDLADLLYIEFGKGFEYRIQLTLGMRD
LGSRLSKHLVSVAERTCCCLFCKCIGGDGTVGDPGPTGKKGPPGFKGSDGYLGEEGIAGE
RGTTGPMGEQGTKGCYGAKGPKGNRGLNGQEGEVGESGIDGLNGEQGDSGLPGAKGEKGD
EGAQGIPGERGIPGDHGAKGLCGDPGVPGFDNGIEGPKGLKGEHGRQGRRGWPGPPGTPG
SRKKTAVHGQRGHTGPQGKTGIPGPDGLAGSLGLKGPQGPRGEAGMKGEKGGLGSKGPQG
LPGPAGEAGSQGRVGSQGNKGEPGDVGEKGPIGLRGPRGLRGDDGNPGYGSVGSKGTKGQ
EGFPGEIGPKGEVGDPGGPGETGPKGTRGKTVSAGLPGEPGSPGELGPPGRKGVKGAKGL
PSFSTCELIQHVQDHSPGRHGAPRCPVHPTELVFALDQSRGVTEPEFARMKEMMTSLLGG
LRVREDHCPAGARVAVLTYDSHARLLIRFSDAYRKDRLLREIEALPYERSTSSRDIGKAM
RFVSRNVFKRMLPGAHTRRIATFFSGGPSADAQTITTAGLEFSALDIIPVVIAFSQVPAI
KRSFAIDNTGRFQVIMVPHRTDSAPALEGLQRCTFCYDVCKPDASCDQARPLAVQSYMDA
AFLLDGSRHVGNAEFEEIRGFLGALLDHFEITPEPETSVTGDRVALLSHAPPHFLPNTQR
SPVRSEFNLTTYKSKRLMKRHVEESVQQLNGDAFIGHALQWTLNNVFLSTPNLRRNKVIF
VISAGETSHLDRETLKKESLRAKCQGYALFVFSLGPSWNDQELEDLASYPLDHHLVQLGR
IHKPDHRYGVKFAKAFISSVRRAINKYPPINIKAKCYRLSSADPQQPLRQLQSFLPGPHK
ATLKEDVLQKAKFFQHKKYLSRIARGSRDDTVQNFTRNTSHKSEKGVIKTAPKQHDKEVL
EEFSLRKHGKTLGLNN
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggacttttccccgagatttcaagttggtgatttttcaggttataatatgaaaatgctg
ctcactttgctccttatgataatttgttcccacgtttctgtcaaccaaaattctggccct
gagtatgccgatgtggtgtttctggtggacagctctgaccacgtgggaattaaatccttc
ccgtttgtaaagacgttcatcaacaaagtgatcaccagcctccccatagaggcccacaag
taccgtgtgggcctggcccagtacagcgacgggctgcacggagaattccagctcagcacc
ttcaagagcagaggccccatgttgaaccacctcaagaagaacttcatgttcctgggtggc
tccctgcggattgggaatgctctccgggaggtgcacacgacctacttctcaaacgggagg
gacaggagacagtttcccccgatcctggtggtcctggcttcggccgagtccgaggatgcc
gtggaagaggcctccgaggtgctgcataacaaaggggtgaggatcatctctgtggggatg
cagggggcatccgaggagaccctgaaggccatggccacaggccagttccactacagcctc
cggacggtccgagacctcagcacgttctcccaaaacatgacgcagattctcaaggatgcg
gctcagtacaaggaaggagcagtcaatgacattcttgtggaagtttgccaaggcccttct
gtggcagatgttgtgttcctgttggatatgtccgtcaacggcagctgggaggactttgac
tatcttaaagaattcctggaaggaagtgtatctgctctggacatcaaggaaaactgcatg
agggttggccttgtggcctatagcaatgagacgaaggtgattcacgcactgagcagtggc
ataaacaagtcagagattctccaggatatacagaacctctctccccaggtcgggaaggcc
tacactggagctgccttgagaaagatcaggaaggaggtcttcagcgtgcagcacggcagt
cggaagaatcagggggtgccacagatagctgtgctggtgacccacagcccgtctgaggac
aacgtgaccaaggctgctgtgaacctccggcgccagggggtgaccatcttcaccatgggc
atagagggggccagcgacgcccagctggagaagatcgcatctcaccctgccgagcagtac
gtctccaaactgaaaaccttctccgacctggctgcccacaaccagacgtttctaaagaaa
ctgcggaaccatatcacacacacagtctctgtcatttccgaaaggactgaaaccctcaaa
tctggttgtgtggacactgaggaagcagacatctatctgctcatcgatggctctgggaac
acccaggccacggacttccaggaaatgaagaccttcctttcagaggttgtagggatgttc
aacatcgctccccagaaggtgcgagttggggctgtccagtatgctgaccgctgggacttg
gaatttgagatcaataaatacaccaacaagcatgatgtgggaaaggccatcgagaacatc
aggcagctgggcgggaacacaaacacaggcgcagccttgaacttcaccctggggctgctg
cagaaagcaaagaggcagcgggaaaacagagtgccatgccaccttgttgttctgaccaac
ggcgtgtcccaggacagcatcttggggcccgcaaacagactgagagaggagctcatccat
gtctatgccatcggggtcaaggaggccaacaagacacagctgcgagaaatcgcaggcgag
gagaagcgggtgtactatgtgcatgactttgatgccttgaaagacataagaaaccaggtt
gttcaagaaatctgtgccgaagaagcctgcaaagagatgaaggccgacatcatgtttctg
gtggacagttctggcagtataggacttgaaaacttcatcaaaatgaaaacatttatgaaa
aacctggtgagcaaatctcagattggggcagatagggtgcaaatcggtgtagtccagttc
agtgacatcaataaggaggagtttcagctcaacagatatatgtcccagggggaaatttca
gatgcaatagaccgaatggctcacattggagaaactaccttgaccggtagcgccctgacc
ttcgtgtctcagtacttcagccctgccaagggggcccggcccaacgtcaggaagttcctc
atcctcatcacggacggtgaggctcaggacatagtcaaggacccagcagtggcacttcgg
caagaaggcataattatctactccgtgggggtgtttggctccaatgtcacccagcttgag
gagatcagtgggaggccagagatggttttttatgttaagaattttgacattctgcagcac
attgaagacgaccttgtttttggaatatgcagcccccgtgaagaatgcaagcgcattgaa
gttttagacatcgtgtttgtaattgacaactctggcagcattgaccatgatgagtataat
atcatgaaggacttcatgattgacttggtgaaaaaagctgatgtggacaagaatcatgtc
cggtttggggctctgaagtacgcggatgacccagaggtgctgttttatctggataagctt
ggcacaaaatgggaggtgatctcggagctccaaaatgaccagcccatggggggcaacact
tacaccgccaaggccctgggcttctcagaccacatgttcactgaagcccggggcagccgc
ctgcacaagggggtcccccaggtcctcatcgtaatcaccgatggggaatcccatgatgcc
gataagctcaatgccacagccaaggccttgcgggacaagggcatccttgtcctggccgtg
gggatcgctggtgccaaccccatggagctgctggccatggcaggatcgagtgacaagtac
ttcttcgtggaaacttttggaagtctgaaggggatattttcagatgtgtccgccagtgtg
tgtaactcttcaaaagtagattgtgaaattgaaaaagtagacctcgtgttcctcatggat
ggttcgaatagcattcatccagatgacttcaagaagatgaagaaattcttggcatctgtc
gttcaagacttcgatgtcagtgtcaacagagtgcgtataggagctgcccagttcagccac
acttaccggccggagtttccactgggaactttcatcggcaaaaaggagatctcctttcag
attgaaaacatccagcagatctttggaaacacgtacattggctctgctctccggcaggta
gggcactacttccagccggacatgggcagccggatcaacacaggtaccccgcaggtgctg
ctggtcctcacagatggccagtcccaagacgaagtggctcaggccgccgaagagctgaga
cacaaagggatcaacatttactccgtgggcatcggggatgtggatgaccagcagctcgtt
cagatcaccgggaccgccgataaaaaactgacagttcacaactttgacgaactgaaaaag
gtcaagaagaggatcgttcgcaacatctgtacctcggggggtgagagcaattgctttgtg
gacattgtggtgggatttgacatctcaacacagcagaatgggcagactttgcttgaaggt
cagccttggatggaaacttaccttccagacatcttacgtgccatcagttccctcagtggg
gtaagctgtgaggtgggcacggagactcaggttagtgtggcttttcaagtgaccaatgcc
atggaaaaatattcccccaagtttgagatctacagtgaaaacatactggacagcttgaag
gatgtaacagttaaaagaccatctcttctcaacacaaacctcttgagttctctgtggggt
gcatttcagaataaatcagctgctcggggaaaggtggttctcttattttcagatggattg
gatgatgatgttgaaaaacttgaacaaaaatctgatgaacttagaaaagaaggcctgaat
gccctcatcacagttgctctggatggagccaccaattccaatgacctggctgaccttctc
tacattgaatttgggaaaggatttgagtacaggatacagctcactcttgggatgagggat
cttgggagccgactgtcaaagcacctggtcagtgttgcagaaaggacatgctgctgttta
ttctgcaagtgcattggaggagatggcacagtgggagaccctggaccaacagggaaaaag
ggacccccaggttttaaaggcagtgatggctacctgggagaggagggcattgctggggaa
agaggaaccaccggaccaatgggagagcaaggtactaaaggatgctatggtgccaaaggt
cctaagggaaacaggggactaaatggacaggagggagaagttggggaaagtggaattgat
gggctaaatggagaacagggtgacagtggtcttccaggagcaaaaggagaaaaaggcgat
gaaggagcccagggaatcccaggagagagagggattcctggtgaccatggagcaaagggc
ctgtgcggagaccctggagttcctggatttgacaatggcatagaaggacccaagggtttg
aaaggagaacacggaagacagggaagaagaggctggccaggcccccctggaaccccaggc
tccagaaaaaagacagcagttcatggccagaggggacatacaggcccacaggggaaaaca
ggcatcccaggcccagatggacttgcggggtcactgggacttaagggtcctcagggccca
agaggagaggctggtatgaaaggagaaaaaggaggtctaggaagtaaaggtccccagggg
cttccaggaccagcaggagaggcagggagtcaaggccgtgtgggaagccaaggaaataaa
ggagaacctggcgatgtgggagaaaagggacccattggccttcggggtcctcgaggcttg
cggggtgatgatggcaacccaggttatggtagtgttggaagtaaaggaacaaaggggcaa
gaaggattccctggagaaattggacctaagggtgaggttggggaccctggtggtccagga
gaaactggacccaagggcactagaggcaagacagtgtctgctgggcttccaggagaaccg
ggatcccctggggagctgggacctcctggacgcaagggtgtgaaaggggccaaaggattg
ccttccttctccacatgtgagctcatccagcatgtacaggaccacagtcctggcagacat
ggagccccgcggtgccctgtgcatcccacggagctggtgttcgcgctggaccagtcccgg
ggcgtcacggagccagagttcgcacggatgaaggagatgatgacctccctactgggtggt
ctccgggtccgggaggaccactgccctgcgggcgcgcgcgtggccgtgctcacctacgac
tcccacgccaggctcctcatccgcttctccgacgcctacaggaaggacagactcctcaga
gagatcgaggcccttccttacgagcggtccacatccagcagggacattggcaaggccatg
aggtttgtctccaggaatgtcttcaagcggatgctcccaggggctcataccagaagaatc
gccacgttcttcagtggcggcccatctgcggatgcccagaccatcacgacggccggcctg
gagttcagtgccctggacattatcccggtggtgatcgccttcagccaggtgcccgccatc
aagcgctcgtttgcgattgacaacactggcagattccaagtcatcatggttccacacagg
actgactctgcgccagcactagagggactccagcggtgcactttctgctacgatgtatgc
aagccggatgcttcttgcgaccaagccagaccactcgccgtgcaatcttacatggacgct
gctttccttctggatggctcccggcatgtgggaaatgcagaatttgaagagataagaggc
ttcctgggagcactgttagatcactttgaaatcaccccagagcctgagacctctgtcact
ggagaccgggtggccctattaagccacgctcccccccacttcctacccaacactcagagg
agtcccgttagaagtgaattcaaccttaccacctacaagagtaaacgtctcatgaagagg
cacgtggaagaatcagttcagcagctcaatggagatgcttttattggtcatgccttacag
tggactctgaacaatgtcttcttgagtacacccaatctgagaagaaataaagtcattttt
gtgatatctgctggggaaaccagtcacttggatagggaaacattaaagaaagaatccttg
agagccaagtgtcaaggttatgccttatttgtgttttcccttggcccttcttggaacgac
caggaactggaagatctagccagctaccctttggatcaccacttggtccagcttggccgc
attcataagcctgaccatagatatggtgtgaagtttgcgaaggcctttataagctcagtc
aggcgtgcaatcaacaaatatccaccaataaacatcaaagcaaagtgctacagactcagc
tctgcagatccgcagcagcccctgcgccagttgcaaagctttcttcctggaccacataaa
gctaccctaaaagaagatgtattacagaaggcaaaattctttcaacataaaaaatatctg
tcaagaatagcaagaggcagcagagatgatactgttcaaaattttacgagaaacacatcc
cataaaagtgagaaaggggtgataaaaacggctcccaaacaacatgataaagaagtgctc
gaagagtttagcctcaggaagcatggtaagactctgggcttaaataactaa
DBGET
integrated database retrieval system
