Balaenoptera musculus (blue whale): 118904848
Help
Entry
118904848 CDS
T09887
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04151
PI3K-Akt signaling pathway
bmus04510
Focal adhesion
bmus04512
ECM-receptor interaction
bmus04820
Cytoskeleton in muscle cells
bmus04974
Protein digestion and absorption
bmus05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118904848 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118904848 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118904848 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118904848 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118904848 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118904848 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bmus00535
]
118904848 (COL9A1)
Proteoglycans [BR:
bmus00535
]
Extracellular matrix (ECM) proteoglycans
Others
118904848 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Toxin_R_bind_N
Laminin_G_1
Laminin_G_3
DUF4882
Motif
Other DBs
NCBI-GeneID:
118904848
NCBI-ProteinID:
XP_036726750
UniProt:
A0A8B8Z3N3
LinkDB
All DBs
Position
12:84486314..84569393
Genome browser
AA seq
923 aa
AA seq
DB search
MKNFWKIPALFFVCSFVGPWASATVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRRAIQRVVGSTALQVAYKLGDQVDFRIPTRQLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSLGKEQVGMKINGQTKSVAFSYKGLDGSLQTVTFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQINVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCHELPTRPSQTTDLRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPG
PPGPPGEPGKPGAPGKPGTPGADGLTGPNGSPGSVGPRGQKGEPGVPGPRGFPGRGIPGP
PGPPGGAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPHSCPPGRSGY
PGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPLGAQGLRGITGIAGAKGE
KGARGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGAQGSRGIPGLPGPKGDTGLPGV
DGRDGIPGMPGAKGELGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQLGN
SGKPGRQGPPGEVGPRGPRGLPGSRGEQGPVGPPGLPGKLGSLGSPGLPGLPGPPGLPGM
KGDRGVVGEPGPKGEQGASGEEGELGERGELGDTGLPGPKGSAGNPGEPGLRGPEGSRGL
PGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIREHFAEMAASLK
RPDAGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGLRGVKGDMGERGD
RGPPGRGPKGLPGASGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGFCE
PASCTLQAGQRALNSKGPDQSKA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaatcccagctctcttctttgtatgcagctttgtgggaccttgg
gcatccgcaactgtcaagcgtcgcccaaggttccctgttaattcaaattctaatggtgaa
aatgaactctgtccaaaggtcaggattggacaagatgatttaccagggtttgacttgatt
tctcagttccagatagacaaagcagcatccagaagagctatccagagggtagtgggatca
actgcattacaagtagcttacaaactgggagatcaggtagacttcaggattccaaccagg
caattatatcccagtgggctgcctgaagaatactcctttctaaccacttttcggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaagattccttggggaaggag
caagttggcatgaagattaatggccaaacaaaatctgttgcattttcatacaagggactg
gacggaagtctccaaactgtgaccttttcgaatttgccctccttgtttgattcccagtgg
cataagatcatgattggcgtggaaaggagcagtgcgactctttttgttgactgcaacagg
atcgagtccttacctataaagccaagaggccaaatcaatgtcgatggctttgctgtgctg
ggaaaacttgtggataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc
cattgtgacccgctgcgacccaggagagaaacttgccacgagctgccaaccaggcccagc
cagaccaccgacctgaggggccccccgggtgagcagggtcctccggggccgccaggcccc
cctggagtcccgggcatcgacggcatcgacggtgaccgaggtccgaagggtcccccgggc
cccccgggccccccgggagagccgggaaagccgggagctccgggcaagcctggcacgccg
ggcgcagacggattaacaggacctaacggatctcctggctctgttggaccgagaggacag
aaaggggaacctggcgtgccgggacctcgtggatttccaggccgtggtattcctggacct
cctggtcctcctgggggagcagggctccccggagagcttggccgtgttggaccgattggt
gaccctgggagaagaggaccaccgggcccccctggtcccccgggacccagcggaacaatt
ggctttcatgatggagatccattgtgtccccattcctgtccaccgggtcgctctggatat
ccaggcctgccaggcatgaggggtcataaaggggctaaaggagagattggtgaacccgga
agacaaggtcacaagggtgaagaaggagaccagggcgaactaggagaggttggagctcaa
ggacctctgggagctcaaggtttgagaggcattactggcatagctggagccaaaggggaa
aaaggcgctcggggcttagatggagaacccgggccgcaaggtctccctggtgcacctggt
gatcaagggcagcgaggacctctaggagaaacaggtcccaagggagacagaggggctcag
ggttctcgaggaattcctggtctccctgggcccaagggcgacacgggcttgccaggtgtg
gatggccgggacgggatacctggaatgccgggagcaaagggtgaactagggaaacctgga
cctcctggtgaagcagggttgcaggggttacctggtatacctggaattcctggcgcaaag
ggtgttgccggtgaaaagggtaacacaggtgctccagggaagcccgggcaactggggaat
tcaggcaaaccgggccgccaggggccaccaggagaggtgggaccccgaggacctcggggc
ctccctggcagtagaggtgaacaaggaccagtaggacccccaggactaccaggtaaactg
ggttctctcggcagccctggcctccccggtttgcctggtccccctggacttcctggaatg
aaaggtgacaggggtgtagttggtgaacctggtccaaagggtgaacagggtgcctctggt
gaagagggagaactgggagaaaggggtgaactcggagatacaggattacctggcccaaag
ggatctgcaggtaaccccggggagcctggcttgaggggacccgaaggaagccgggggctt
cctggggaggaaggaccgcgaggaccacctggcccgcgaggcgtgcagggagaacagggc
gccaccggcctgcccgggatccagggccctcccggcagggcaccaacggaccagcacatt
aagcaggtctgcatgagagtcatacgagagcattttgctgagatggctgcaagtctcaag
cgtccagacgccggagcctcgggcctccccgggcggcctggcccccctggtcccccaggc
ccccctggagagaacggtttcccaggccagatgggacttcgaggcctcccgggcatgaag
ggcccccccggggctcttggtttgaggggagtgaaaggtgacatgggggaaagaggtgat
cgtggccccccaggaagaggtcccaaaggtttgcccggggcttcaggtctcccaggtgac
ccaggtcctgccagctacgggaggaatggccgggatggtgagcgaggccccccaggggtg
gcaggcatccctggcgtacccggccccccgggacctcctggccctcctggtttctgcgag
ccagcctcctgcaccttacaggctgggcagcgggcactgaatagcaaaggtccagatcaa
tcaaaggcttag
DBGET
integrated database retrieval system
