Bacillus mycoides ATCC 6462: BG05_4842
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Entry
BG05_4842 CDS
T03798
Name
(GenBank) phoH-like family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmyo
Bacillus mycoides ATCC 6462
Pathway
bmyo03420
Nucleotide excision repair
bmyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BG05_4842
03430 Mismatch repair
BG05_4842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmyo03400
]
BG05_4842
Enzymes [BR:
bmyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG05_4842
DNA repair and recombination proteins [BR:
bmyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BG05_4842
MMR (mismatch excision repair)
Other MMR factors
BG05_4842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_22
DEAD
AAA_30
NACHT
AAA_16
nSTAND3
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
AJH19076
UniProt:
A0A0B5S180
LinkDB
All DBs
Position
4681141..4683477
Genome browser
AA seq
778 aa
AA seq
DB search
MNKKLDQEQKRLDNVIETITEQIDKLESETGRRRAEVINIRKHFWDDVKVNTDTFDDYLE
TVINLRQQAQSLAVTQITHKHTFNRLAALRRMHKAPYFGRIDFKEEGESGAEQIYIGVAT
LTDASGENFLIYDWRAPISSVYYDYPPGPAEYSTPGGVICGNVEKKLQYIIQNGEIDSMF
DTSLTIGDEILQQALGKGTNKHMQSIVATIQREQNEIIRHDEGRLLIVQGAAGSGKTSAA
LQRIAYLLYKYREWLKADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLNHRLSK
AFDVEDPYEQLEYMLTETNSPTYKTRNASIRFKASTQFFEMIRAYRQSLESSGMLFRGMK
FRGKLIASAKEITEQFYNTDSSLRFHNRIEKLTDWLNKQIDTIEKTELKKPWVEEEIELL
SKDEYQKAYKYLQKKGEFDDNSFNDYEKETKVLGRMIVRKKLKPLRKGVQALRFINFTGI
YKQLFTDASWVTGEKPKEWDEICSLTVNMLDEGKLHYEDATPFLLLKELIEGFQTNRSIK
HVLVDEAQDYSPFQFEFLKRLFPAAKMTVLGDFNQAIFAHASEAVNFNTLTSLYGPDETN
GINLTRSYRSTKPIIEFTRYLVPEGKNINAFERDGEKPTVTKVSDYSELHDRITSKVAEL
QKQQHNTIAIICKSAAESAAAYEALSHIENIKLVKSNSAEYEQGIVVIPAYLAKGIEFDA
VIIYDASKDVYSDESLRRLFYTACTRAMHELQLYSVGEVSPFVTGAASESFKCITKTP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaacttgatcaagagcaaaaacgattggataacgtaatagaaacgattacg
gagcaaattgataaactggaaagcgaaactggcagacgccgggcagaagtaatcaacatt
cgcaaacacttctgggatgatgttaaagttaacactgatacttttgacgattatcttgaa
acagttatcaacttaagacaacaagctcagtcactagccgtaacacaaattacccataag
cacacctttaatcgacttgccgcactacgccgtatgcataaagcaccttacttcggacga
attgatttcaaagaagaaggcgaatctggcgcagaacaaatttatatcggggtggctaca
cttaccgatgcaagtggagaaaactttcttatatacgattggcgcgcaccaatttcaagt
gtttactacgattatccaccaggaccggctgaatacagcacaccaggaggcgtaatctgc
ggcaatgtggagaagaaattacaatatattattcagaatggcgagattgattcaatgttc
gatacgagcctcacaattggagatgaaattctgcaacaagcgctcggaaaaggaacaaac
aaacatatgcaaagtatcgttgctactatccagcgcgagcaaaatgaaattatccgtcac
gatgaagggcgactacttatcgttcaaggagctgctggtagcggtaaaacgtcagctgcc
ctgcagcgaatcgcctacttactatataaatatcgcgaatggttaaaagcagatcaaatt
attctcttctcccctaactctatgttcaacagctacgtttctaacgtactacctgaactc
ggtgaagaaaatatgcagcaagtgacattccaagaatatttaaaccatagactcagtaag
gcatttgacgttgaagacccttatgagcaattagaatatatgttaactgaaacgaatagc
cctacctataaaactcgaaatgcgagcattcgatttaaagcatccactcaatttttcgag
atgattagagcgtacagacaatcccttgaatcttcaggcatgctatttagaggaatgaaa
tttagaggaaagttaattgcttctgctaaagaaattacagaacaattttacaacactgac
tcctccctccgcttccataatcgaattgagaagttaacggattggctaaacaaacaaata
gacacaattgaaaaaacagaactgaaaaagccttgggtagaagaagaaattgaactactt
agtaaagatgaatatcaaaaagcttataaatacttacagaaaaaaggcgagtttgatgac
aactcctttaatgattatgaaaaagaaacgaaagtactcggacgtatgattgtccgtaaa
aaattaaaaccgttacgtaaaggcgttcaagcgctacgttttatcaattttacaggcata
tataaacaactcttcacagatgcatcatgggttactggcgaaaagcctaaagaatgggac
gaaatttgctcattaactgtgaacatgcttgatgaaggaaagctacattatgaggatgcg
actccatttttacttttaaaagaattaattgaaggcttccaaacgaacagatcgattaaa
cacgtacttgtagacgaagcacaagattattctccgtttcagttcgagtttttaaaacgt
ctcttccctgccgcaaaaatgacagtactcggagactttaaccaagcgatatttgcccat
gcgagtgaagcagtgaatttcaatacacttactagcttatacggacctgatgaaacgaac
ggcatcaacttaactcgtagctatcgatcaacaaaaccgattattgaattcacacgctat
ctcgtaccggaaggaaagaatattaacgcctttgaacgtgacggcgagaaacctacagtg
actaaagtttctgattacagcgaactgcatgatcgtatcacttctaaagtcgctgaacta
caaaagcaacagcacaatacgatcgcaattatatgtaaatccgcggctgaaagtgccgct
gcctacgaagcacttagtcatatcgagaatattaaactcgtgaagagtaactcagccgag
tatgagcaaggaattgtcgtgatccctgcttacttagcgaaaggtatcgaatttgatgct
gttattatttacgatgcttctaaagatgtatacagcgatgagagcctacgtagattgttc
tacactgcttgtacacgcgcaatgcatgaattgcagctttatagcgttggtgaggttagt
ccttttgtaacaggggctgcttcggagagttttaaatgtataacgaaaacaccttga
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