Brassica napus (rape): 106348688
Help
Entry
106348688 CDS
T04128
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106348688
09123 Folding, sorting and degradation
03018 RNA degradation
106348688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106348688
03041 Spliceosome [BR:
bna03041
]
106348688
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106348688
mRNA degradation factors
5'-3' decay
Lsm complex
106348688
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106348688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
106348688
NCBI-ProteinID:
XP_013643934
LinkDB
All DBs
Position
C7:42608664..42610401
Genome browser
AA seq
129 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPPGVGRGRGRGVDDGGARGRGRGAPMAKMSG
NRGAGRGRG
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttcgctgctcaagactgctcaagggcatcccatgcttgtggagctcaag
aatggagagacgtacaatgggcatttagtgaattgtgatacgtggatgaacattcatctg
cgtgaagtcatctgcacatcaaaggacggagacaggttttggaggatgccggagtgttat
atccgcggtaacactatcaagtaccttcgagttccagatgaggtgattgataaagtacag
gaggagaagacccgcacagatagaaaaccaccaggggttggacgtgggagaggacgtggt
gtggatgatggaggggccagaggccgtggtcgaggagctccaatggcgaagatgagtggc
aacagaggagcaggtcgtggccgtggttga
DBGET
integrated database retrieval system