KEGG   Brassica napus (rape): 106348688
Entry
106348688         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106348688
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106348688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106348688
   03041 Spliceosome [BR:bna03041]
    106348688
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106348688
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106348688
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106348688
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 106348688
NCBI-ProteinID: XP_013643934
LinkDB
Position
C7:42608664..42610401
AA seq 129 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPPGVGRGRGRGVDDGGARGRGRGAPMAKMSG
NRGAGRGRG
NT seq 390 nt   +upstreamnt  +downstreamnt
atgcttcctctttcgctgctcaagactgctcaagggcatcccatgcttgtggagctcaag
aatggagagacgtacaatgggcatttagtgaattgtgatacgtggatgaacattcatctg
cgtgaagtcatctgcacatcaaaggacggagacaggttttggaggatgccggagtgttat
atccgcggtaacactatcaagtaccttcgagttccagatgaggtgattgataaagtacag
gaggagaagacccgcacagatagaaaaccaccaggggttggacgtgggagaggacgtggt
gtggatgatggaggggccagaggccgtggtcgaggagctccaatggcgaagatgagtggc
aacagaggagcaggtcgtggccgtggttga

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