Brassica napus (rape): 106354342
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Entry
106354342 CDS
T04128
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106354342
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP100
106354342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
bpMoxR
AAA_14
nSTAND3
AAA_7
IstB_IS21
ATPase_2
RuvB_N
TniB
AAA_28
TsaE
DUF815
NACHT
RNA_helicase
NBD_SMAX1
Zeta_toxin
ResIII
Mg_chelatase
AAA_19
T2SSE
ABC_tran
AAA_25
DNA_pol3_delta2
DUF87
DUF2987
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
106354342
NCBI-ProteinID:
XP_048617378
LinkDB
All DBs
Position
C6:complement(45049592..45053475)
Genome browser
AA seq
911 aa
AA seq
DB search
MNPEKFTHKTNETIAAAHELAVNAGHAQITPLHLAGALISDPSGIFPQSISSAGGENAAQ
SAERVINQALKKLPSQSPPPDDVPASSSLIKAIRRAQTAQKSRGDTHLAVDQLVIGLLED
SQIKDLLKEVGVAAAKVKSEVEKLRGKQGKKVESASGDTNFQALKTYGRDLVEEAGKLDP
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLIS
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGKTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVVDTISILRGLKEKYEG
HHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEIELHALEREKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKR
EELMFALQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSDENMMLTENVGPEHIAEVV
SRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQDQAVSAVAEAILRSRAGLGRPQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG
QLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSNL
GAEHLLSGLTGKVSMQVARECVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM
KEVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEID
ENSTVYIDAGSGGSDLVYRVEKNGGLVNATTGKKSDVLIHIANGPKKSDAAQAVKKMRIE
EIDDDEEMVED
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagagaagttcacacacaagacaaacgagacaatagccgccgctcacgagcta
gccgtgaacgcaggacacgcacagatcactcccctgcacttagccggcgctttgatctcc
gacccttcaggtatcttccctcaatctatctccagcgccggaggagaaaacgcagctcag
tcagcagaaagagtgatcaaccaagctttaaagaagctcccctcgcagtcccctccacca
gacgacgttccagctagctcaagcctcatcaaagcgatacgccgcgctcaaaccgcacag
aagtcacgcggcgacacacacttagccgtggaccagcttgtcattggcctcctcgaagac
tctcagatcaaggacctcttaaaagaagttggggtcgcagcggcgaaggtgaaatccgaa
gttgagaagttgcgtgggaagcaaggaaagaaagttgagagcgcttcaggggatacgaac
ttccaagcgttgaagacttacggaagagacttggtcgaagaagcggggaagcttgatcca
gtgattggtcgtgacgaggagattagaagagtcgttaggatcctctcgaggagaaccaag
aacaaccctgtccttatcggagagccaggtgtcgggaaaacagctgttgttgaaggctta
gctcaacggatcgtcaaaggagacgtccccaacagtctcaccgacgtgagattaatctcc
ttagacatgggcgcgttggtcgctggcgctaagtacagaggagagtttgaagaaagacta
aaagctgtgttgaaagaagtcgaggaagctgaagggaaagtgattctgtttatagatgag
attcatttggttttgggagctgggaagaccgaagggtcgatggacgctgcgaatctgttt
aagcctatgctggctagaggccagctgcgttgcattggcgccacgacgcttgaggagtat
aggaagtacgttgagaaagacgctgcctttgagagaaggtttcagcaagtgtatgtggct
gagccgagtgtggttgatactattagtatcctgagagggcttaaggagaagtatgaggga
caccatggtgttcggatccaggacagagctcttatcaatgctgctcagctctctgctcgt
tacatcactggtcggcatttaccggataaagcgattgatttggtggatgaggcttgtgcc
aacgtgagagtccagcttgatagccaacctgaggagattgacaacctcgagaggaagagg
atgcagctggagattgagctacacgccttggagagggagaaagacaaggccagcaaagct
cgccttgtggaggtaaggaaagagctcgatgacttgagggacaagctacagcctctgacg
atgaagtacagaaaggagaaagagaggatcgacgagatcaggaggctgaagcaaaagaga
gaagagctcatgttcgccttgcaggaggcagagcgtagatacgatctcgctagagctgct
gacttgagatacggagcgattcaagaagtggagtccgcgatagctcagctcgaagggacc
tctgatgagaacatgatgctcaccgagaatgtggggcctgaacatatagctgaggttgtg
agcaggtggactgggattccggtgacgaggcttggacagaacgagaaggagaggctgatt
ggtcttgctgataggttgcacaagagagttgtggggcaagaccaagcggtgagtgcggtt
gctgaggctattttgaggtcgagggcggggcttggaaggccgcaacagccgactggttcg
ttcttgtttcttggtccgaccggtgttggtaagactgagctagctaaggctcttgctgag
cagctgtttgatgatgagaacctcttggttcggattgatatgtccgagtatatggaacaa
cactctgtctctcgcttaatcggtgcaccacctggctatgttggtcatgaggaaggagga
cagctaactgaagctgtaaggaggcgaccttactgtgtaatactctttgatgaagtggag
aaagcacacgttgctgttttcaacacgttgctccaagtgttggacgatggtagattgacg
gatggtcaagggaggacggttgatttcaggaactcggtgataatcatgacgtcgaacctc
ggcgcagagcatcttctctcggggctgactggtaaagtgtctatgcaagtggctagagaa
tgtgtgatgcaggaggtgagaaggcatttcagaccggagctgctgaacaggcttgacgag
atcgtggtgttcgatcctctttcgcatgagcagttgaggaaagtggcgaggcttcagatg
aaggaagttgctgtcaggcttgctgagagaggtgtggctttggcagttactgatgctgct
ttggactatattctggcggagagttatgatcctgtgtatggtgctaggccaataaggaga
tggatggagaagaaggtggtgacggagttgtcaaagatggttgtgcgtgaggagattgat
gagaactcaactgtttatatagatgcaggcagtggtggatctgatcttgtgtaccgtgtt
gagaagaatggagggttggtgaatgctacaacagggaagaagtcggatgtgttgatccat
atagctaatgggccaaagaaaagtgatgcagctcaggcggtgaagaagatgaggattgag
gaaatagatgatgacgaagagatggttgaggactaa
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