Brassica napus (rape): 106366040
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Entry
106366040 CDS
T04128
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
bna04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106366040
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
106366040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106366040
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106366040
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106366040
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
106366040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
106366040
NCBI-ProteinID:
XP_013661046
UniProt:
A0A816NLY1
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Position
A9:complement(3960929..3962410)
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AA seq
389 aa
AA seq
DB search
MGLVFDWSESPETTVILCFHMNTHRTQKQEQEQEEEARHEWDLSLSTVVSSSSSSASDVV
GAIEFDPTDNILATAGISRKIRFYGLASLLRNTAGVCGGAGGGVSFVDQVTACEYYICTP
AKLSSLRWRPGSCSRVIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGAA
TVGASGSDDGTMQVWDPRCPPEESVGVVRPAGLCRSAVCCVEFDPSGGHAVAVGCADRRG
YVYDMRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHV
NNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWRKPVWVDGFEPVGMTSGSDKRFVSSVC
WRQSGVDQCTLVAGGSDGVLQVYVGKRKP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggattggttttcgattggtccgaatccccagaaacaacagtcattctctgttttcat
atgaacactcatcgtacgcaaaagcaggaacaagaacaagaagaagaagcaagacacgaa
tgggatctttctctctccaccgtcgtctcttcttcctcctcctctgcctccgacgttgtc
ggagctattgagttcgacccgactgataacatcctcgctaccgccggaatctctagaaag
attcgtttttacggcctcgcttctctcttacggaacaccgccggagtctgcggaggagca
ggaggaggagttagcttcgtcgatcaagttactgcatgtgaatattacatctgcacgccg
gcgaagcttagtagtctccggtggagacccgggtcgtgcagtcgggttatcgggtcgggt
gattacgacggcgttgtgacggagtacgatctcgagaagaggacgccggtattcgagcgg
gacgagcacggaggccgccgcgtctggagcgtggattacactcgtcacggtggcgccgcc
accgtgggagcgtcgggatcagacgacgggactatgcaggtgtgggatcctagatgtccg
ccggaggaatctgtcggcgttgtccggccggcgggactttgccggagtgccgtctgctgc
gtcgagtttgatccctccggcggacacgcggtggctgtcggatgcgctgatcggagaggg
tacgtgtacgatatgaggaaactcgttgacccggcgttgactttgcagggtcataccaaa
acggtgtcgtatgtgaggtttctcgacggtggtacggtggtgacggcaggtacggacggg
tgtctgaagctgtggagcgtggaggacgggcgcgtgattcgcacttacgaggggcatgtg
aataaccggaacttcgtggggttgtctgtgtggagaaacggcgcgctgtttggttgcgga
tcggagaacaacagggtgttcgtgtacgataggaggtggaggaagccggtttgggtagac
gggtttgaaccggttggtatgacttctggttcggataagcggttcgtaagtagcgtttgc
tggaggcaatccggtgtggaccagtgtacgctagtggctgggggatctgatggagtgttg
caggtttacgtgggcaaaagaaagccatag
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integrated database retrieval system