KEGG   Brassica napus (rape): 106366040
Entry
106366040         CDS       T04128                                 
Name
(RefSeq) WD repeat-containing protein RUP2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Pathway
bna04120  Ubiquitin mediated proteolysis
bna04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106366040
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    106366040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106366040
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106366040
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106366040
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106366040
SSDB
Motif
Pfam: WD40 WD40_like
Other DBs
NCBI-GeneID: 106366040
NCBI-ProteinID: XP_013661046
UniProt: A0A816NLY1
LinkDB
Position
A9:complement(3960929..3962410)
AA seq 389 aa
MGLVFDWSESPETTVILCFHMNTHRTQKQEQEQEEEARHEWDLSLSTVVSSSSSSASDVV
GAIEFDPTDNILATAGISRKIRFYGLASLLRNTAGVCGGAGGGVSFVDQVTACEYYICTP
AKLSSLRWRPGSCSRVIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGAA
TVGASGSDDGTMQVWDPRCPPEESVGVVRPAGLCRSAVCCVEFDPSGGHAVAVGCADRRG
YVYDMRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHV
NNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWRKPVWVDGFEPVGMTSGSDKRFVSSVC
WRQSGVDQCTLVAGGSDGVLQVYVGKRKP
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgggattggttttcgattggtccgaatccccagaaacaacagtcattctctgttttcat
atgaacactcatcgtacgcaaaagcaggaacaagaacaagaagaagaagcaagacacgaa
tgggatctttctctctccaccgtcgtctcttcttcctcctcctctgcctccgacgttgtc
ggagctattgagttcgacccgactgataacatcctcgctaccgccggaatctctagaaag
attcgtttttacggcctcgcttctctcttacggaacaccgccggagtctgcggaggagca
ggaggaggagttagcttcgtcgatcaagttactgcatgtgaatattacatctgcacgccg
gcgaagcttagtagtctccggtggagacccgggtcgtgcagtcgggttatcgggtcgggt
gattacgacggcgttgtgacggagtacgatctcgagaagaggacgccggtattcgagcgg
gacgagcacggaggccgccgcgtctggagcgtggattacactcgtcacggtggcgccgcc
accgtgggagcgtcgggatcagacgacgggactatgcaggtgtgggatcctagatgtccg
ccggaggaatctgtcggcgttgtccggccggcgggactttgccggagtgccgtctgctgc
gtcgagtttgatccctccggcggacacgcggtggctgtcggatgcgctgatcggagaggg
tacgtgtacgatatgaggaaactcgttgacccggcgttgactttgcagggtcataccaaa
acggtgtcgtatgtgaggtttctcgacggtggtacggtggtgacggcaggtacggacggg
tgtctgaagctgtggagcgtggaggacgggcgcgtgattcgcacttacgaggggcatgtg
aataaccggaacttcgtggggttgtctgtgtggagaaacggcgcgctgtttggttgcgga
tcggagaacaacagggtgttcgtgtacgataggaggtggaggaagccggtttgggtagac
gggtttgaaccggttggtatgacttctggttcggataagcggttcgtaagtagcgtttgc
tggaggcaatccggtgtggaccagtgtacgctagtggctgggggatctgatggagtgttg
caggtttacgtgggcaaaagaaagccatag

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