Brassica napus (rape): 106368216
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Entry
106368216 CDS
T04128
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bna03110
]
106368216
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP100
106368216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
AAA_18
IstB_IS21
TniB
Zeta_toxin
AAA_7
RNA_helicase
Mg_chelatase
AAA_28
NACHT
AAA_25
AAA_24
ResIII
ABC_tran
NBD_SMAX1
Torsin
DUF848
Motif
Other DBs
NCBI-GeneID:
106368216
NCBI-ProteinID:
XP_013663578
UniProt:
A0A816KA70
A0A816WLZ8
LinkDB
All DBs
Position
A2:complement(1681830..1686085)
Genome browser
AA seq
964 aa
AA seq
DB search
MATTATSAFSGVIGVGSESRKVSTFSHLQPSVAFPAKPNSFKSLKLKHSARLTRRLEHRP
FVVRCEASSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLARR
IFSKIGVDNTKVLEATEKFIQRQPKVYGESAGSMLGRDLEGLFERARKYKKDLGDSYVSV
EHLVLAFAQDKRFGKQLFKDFQISEKSLKTAIESIRGKQSVIDQDPEGKYEALEKYGKDL
TAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDV
PQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGA
TNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTIS
ILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSK
PTALDELDRAVIKLEMERLSLTNDTDKASRERLSRIETELLSLKEKQAELTQQWEHERSV
MSRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELDEYLSSGK
SMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHKRVVGQNPAVTAVAEAI
QRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKHAVS
RLIGAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQG
RTVSFTNTVIIMTSNVGSQFILNNTDDDAKELAYETIKQRVMDAARSIFRPEFMNRVDEY
IVFQPLDRDQINSIVRLQLARVQKRIADRKMKIEVTDAAVDLLGSLGYDPNYGARPVKRV
IQQNIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLIFKKIESETADAGKEEE
VFSK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgactgctacgtcggcgtttagtggcgtgatcggcgtaggatcggagtcccga
aaggtttctactttctctcatctccaaccatctgtagcttttccggcgaagcccaattcc
ttcaaatcactgaaactgaagcacagcgcgaggctcacgcggaggctcgagcatcgaccc
ttcgtcgtccgatgtgaagcttcatccaacggaaggctgacacagcaagagttcacagag
atggcgtggcaatcgatagtttcgtcaccagacgtggctaaagagaataagcaacagatt
gtggagacagagcatttaatgaaagctctcttggagcagaagaacggtttagctcgtagg
atcttctctaagatcggtgtggataacactaaggttctagaagcaacagagaagttcata
caacgccaaccaaaggtgtatggagaatctgctggttcgatgttgggacgtgaccttgaa
ggtctgtttgagagagctagaaagtataagaaagacttgggagactcttacgtctcagtg
gagcatttggttcttgcttttgctcaggacaagcggtttggtaaacagttgtttaaggat
tttcagatatctgagaagagtttgaaaactgctattgagtccattagagggaaacaatca
gtcattgaccaagatccggaagggaagtatgaggcgttggagaagtatggtaaagacttg
acagcaatggcgagagaaggaaagcttgatcctgtgattggaagagatgatgagatccgt
agatgcattcagattctgtccaggaggacaaagaacaaccctgtgttgattggtgaacct
ggtgttggtaaaaccgcaatttcagaaggacttgctcagaggattgtgcaaggagatgta
cctcaagctttgatgaatagaaagttgatatctctagacatgggtgcacttatagctgga
gcaaagtatagaggagagttcgaagatagactaaaggctgttctcaaggaagtcacagac
tcggaaggccaaatcattttgttcatcgatgagatccacacagttgttggtgcaggtgca
actaatggggcaatggatgctggtaatctactaaagccaatgcttggtcgaggcgagcta
agatgtataggtgcaacaacgcttgatgagtacaggaagtacatagagaaagatccagcc
ttggaacgtaggtttcaacaggtttatgtagatcagcccaccgttgaagacactatttca
attctccgtggtttgcgggaaaggtatgagcttcatcatggagttcgcatctcggacagt
gctctagtggaagctgctatcctctctgaccgttatatcagtggccggtttctacctgac
aaagcaattgacttggtcgatgaagcagcagccaaactaaaaatggaaatcacctcaaaa
cccacagctctcgacgagcttgaccgtgcagtgataaagctcgaaatggagaggctatca
ctaaccaacgacacagacaaagcttccagagaaaggctgagccgtatcgaaaccgagcta
ttatcactaaaggagaagcaagccgagttaacacaacagtgggagcacgagaggtccgtc
atgtcccgtctccagtccatcaaagaagagatcgacagagtaaacctcgagatccagcag
gccgagcgcgagtacgatctaaaccgcgcagcagagctcaaatacggaagcttgaactcg
ctccagcggcagctaaacgaagctgagaaggagcttgacgagtacttaagctccgggaag
tcgatgttcagagaagaggttttgggaagcgacatagctgagattgtgagtaaatggact
ggcatacctgtctccaagctccaacagtcagagagagataaactcttacatttggaagaa
gagttgcataagcgtgtagtgggtcagaaccctgcagtgactgcagtagccgaagcgatc
caacggtcgagagctgggctatctgatcctggccgtccgatagcttccttcatgttcatg
gggccgaccggtgtcggcaaaaccgagctggctaaggccctcgcttcttacctcttcaac
acggaggaagctttggtgagaatcgacatgagcgagtacatggagaaacacgctgtttcc
agactcatcggtgctcctcctggatacgtcgggtacgaggaaggagggcagttgactgaa
acggttagaagaaggccttactcggtgatcctcttcgacgagattgagaaggctcatgga
gatgtgttcaacgtgtttctccagatcctggacgatggtagggttactgactctcaggga
cgtaccgtgagtttcactaatacggtgattatcatgacatctaacgtcggctcgcagttt
atcctgaacaacactgatgatgatgctaaggagctcgcttacgagaccattaaacagaga
gtgatggatgctgctagatcgatctttcgccccgagtttatgaacagggttgatgagtat
atagtcttccagcctctcgaccgcgaccagatcaacagcattgtccggttacagcttgct
cgtgtgcagaagcggattgcggacaggaagatgaagatagaggtcacagatgcggcggtg
gatcttcttgggagccttgggtatgatcctaactatggagctagacctgtgaagcgtgtg
atacagcagaacattgagaacgagctggctaaaggtatcttgagaggagatttcaaggaa
gaagatggcattttgattgatacggaggtcacagcgttctccaatggtcagttacctcag
cagaagctcattttcaagaagattgagtcggaaacagcggatgctggaaaagaagaagaa
gttttttcaaaatag
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