Brassica napus (rape): 106378037
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Entry
106378037 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor 25
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106378037
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
106378037
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Motif
Pfam:
Pectinesterase
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
106378037
NCBI-ProteinID:
XP_013673683
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Position
C1:48634078..48635584
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AA seq
364 aa
AA seq
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HVLIYFFYFFIQVLRKTCDNDKDCRKAARKLGELGVTSGGSILVSQAVIVGPYKSDNFTT
ITDAIAAAPNNARPEDGYFVIYAREGVYEEYIVVPINKKNLLLMGDGINKTIITGNHNVV
DGWTTYNCSSFAVTGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSTFYRCSFEGYQDTL
YVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRTEPNQNTG
ISIINCTIKAAPDLAADPTSTMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTTGL
DTIYYGEYDNFGPGAKTDRRVQWLGYNLLDMAQAMNFTVYNFTLGDTWLPQTDIPFYGGL
VRKE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
catgttttgatatactttttttatttttttatacaggttttacgtaaaacatgcgacaat
gacaaagattgtcggaaagctgcccggaagctgggtgagcttggggtgactagcggcggt
tccatccttgtcagtcaagcggttatcgtcggtccatacaaatccgacaacttcacaacc
attactgatgcaatagcagcagcacctaataacgctagaccggaggatggttactttgtc
atatacgcaagggaaggtgtctacgaagaatatatcgttgttccaatcaacaaaaagaat
ttattgcttatgggagatggaatcaataagacgatcattacggggaaccataatgttgtt
gatggttggactacgtataattgctcgagctttgcggtgactggagaacggttcatggca
gttgatgttacattcagaaacacagctggacctgagaagcatcaggccgtggccttgaga
aacaatgcggaaggatccactttctaccggtgtagttttgaaggctatcaagatactctc
tacgtccattctcttagacagttctatcgcgaatgcgatatatatggtaccatcgatttt
atatttggaaacgcagctgcaatctttcaaaactgcaatatatatgctagaaaaccaatg
gcaaagcagaagaatgcaattacagcccatggaagaaccgaaccaaaccaaaacactgga
atctctatcatcaactgtaccatcaaagccgcaccagatctagcagctgatcctacctca
accatgacgttcctaggacggccatggaagccttactcaaggacggttttcatgcaatca
tatattagtgacattgttcaaccagtgggatggctcgaatggaatggtaccactggatta
gacacgatttactacggcgagtatgataacttcggaccaggggcaaagacagaccggaga
gtgcagtggttagggtacaatttattggacatggcacaagcgatgaacttcacggtttac
aactttaccctgggagatacttggttgcctcaaaccgatattccattctatggtggtttg
gttcgcaaagaatga
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