Brassica napus (rape): 106378341
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Entry
106378341 CDS
T04128
Name
(RefSeq) non-lysosomal glucosylceramidase isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106378341
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
106378341
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
106378341
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Gene cluster
GFIT
Motif
Pfam:
DUF608
Glyco_hydr_116N
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
106378341
NCBI-ProteinID:
XP_048604439
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Position
C2:complement(36793485..36798555)
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AA seq
949 aa
AA seq
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MESELQTQLVGSETLSLPQVTWQRKLNSKVKNPSEFKMSTSDFLHLFPIGYRLWRHTKQE
AAKGKVSIYDIFKKKNVKGNHGVPLGGVGAGSIGRSYKGEFQQFKLFPKVCEEAPILTNQ
FSVFVSRPGGVNYSTVLCATSPESANGRTEDLGIESWDWKIKGDKSTYHALYPRSWTVFN
EPDPKLRIVSRQVSPFIPNNYKESSFPVSVFAFTATNLGKEEATVTLLFTWEVTNFKPKK
RHILFISLNIRANFCLCINLELSGRSFWVYWRTLQLINNGKRWSTCNSFTSQSVCLLTYR
TANGHPPVTYAIAAQETDDVSVSECPCFLVSGYSPNEITPRAMWDEIKKNKSFDQLPCEP
GSPSRPGTAIGAAIAAKVKVPPGCDRTVTFSLSWDCPEVRFNERTYHRRYTRFYGSLGDA
AVNMARDALLNYGNWESQIEEWQNTILLDTSLPDWYRVTLFNELYYFNSGGAIWTDGLPY
KQTTERSTEQNSNDTDILQKINAVCDQVHHSPQSQNAEENIGQFLYLEGIEYLMYNTYDV
HFYSSFPLLILFSKLELSIQRDFAAAVMFQDPTKKEIMSSGELVPRKLLGSVPHDIGLNN
PWLELNAYNLFNTDRWKDLNAKFVLQVYRDVVATGDYSFARAVWPSVYLAVAYLDQFDKD
EDGMIENEGLPDQTYDTWSVTGVSAYCGGLYVAALQAASAFATIVGENAVAFYFNAKYEK
AKTVYEKLWNGSYFDYDNSGSDSSSSILADQLAGQWYARACGLKPITKEEWIKKALETIH
EFNVMKVRGGTRGAVNGMSPDGQVDTNSLVSKEVWAGTTYSVAACMIQEGQREKGFQTAS
GIYEAVWSDRGLSCSFQTPEAWNMNDEYRSLCYMRPLAIWAMQWALTPIQTFGGEKQNLM
AGDEDESDLLLRQHNGFKEVARYVKIAKSTEHRSLLQEKYEAILTTFHL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaacttcaaacccagttggttggaagtgagacactctcacttcctcaagta
acatggcagcggaagttgaacagcaaagtaaagaacccttctgagttcaagatgagtaca
agcgattttcttcacctgtttccaataggctatagattgtggcgtcacactaaacaagag
gcagcaaaaggaaaagtatccatttacgatatcttcaaaaagaagaatgtaaaaggcaac
catggtgtccctttaggtggagttggtgcaggaagcatcggaaggagttacaaaggtgag
tttcagcagttcaagctcttccctaaagtttgtgaagaagctccaatcctcacaaatcag
ttctctgtttttgtttcgagacccggtggtgtaaattactcaactgttctatgcgcaaca
agtccagagtctgcaaatggtagaacagaagatttaggaatagagtcatgggattggaag
ataaagggggacaaatctacgtatcatgctctgtatcctaggtcttggactgtcttcaac
gagcctgaccctaaactcagaatagtttctcgtcaagtctctccctttataccgaataac
tacaaggaaagcagttttccagtatccgttttcgcttttacggcgactaatcttggaaaa
gaagaagcaacggttactttgctctttacatgggaggtgactaatttcaaaccaaaaaag
agacatatattgttcatatctttaaacattcgtgccaatttttgtctctgtataaattta
gaactcagtgggaggagcttctgggtttactggagaacacttcaactcatcaataatgga
aagagatggagtacatgcaatagctttacatcacaatcggtatgtttattaacttacaga
acagccaatggacacccaccagttacttacgccattgcagcgcaagaaacagacgatgtt
agtgtctctgagtgtccatgcttcttggtttctggttattctcctaatgaaatcacacca
agagctatgtgggatgagatcaaaaagaacaaatcattcgaccaattgccttgtgagcca
ggctcaccttcgagacctggaacagccattggagcagccatagctgctaaagtgaaggtc
cctccaggttgtgaccgtacagtcacgttttctctctcatgggactgtcctgaagtgcgg
tttaatgagaggacttaccacagacgatacacaagattctatggctctttaggcgacgca
gcagtgaatatggctcgtgacgctcttcttaattatggtaattgggagtctcagattgaa
gaatggcaaaacactattcttttagacacttcactccctgattggtatagagtcactcta
ttcaacgaactatactatttcaactctggaggagctatctggacagatggcttgccctac
aagcaaactacagaaagaagcactgaacagaacagtaatgatacagacatcctccagaaa
atcaatgcggtttgtgatcaggttcaccactctcctcagtctcaaaacgcggaagagaac
attggacaattcttatacctcgaaggaattgagtatctaatgtacaacacttacgacgtt
cacttctactcttcctttccacttctcattctcttctctaagctcgaactcagcatccag
agagactttgcagcagcggttatgttccaagatcccaccaagaaagagatcatgagctcc
ggcgagttggttccaagaaaactgctaggatcggttcctcacgacatcggtctaaacaat
ccttggcttgaactaaacgcgtataacttgttcaacacggatcgttggaaagacttgaac
gccaagtttgttcttcaagtctacagagacgtggttgcaaccggagattatagcttcgca
agagcggtttggccatctgtttacctagcggtggcttatttggatcagttcgataaggac
gaggacggtatgattgagaacgaagggttaccggaccagacatacgacacgtggagtgtt
acaggcgttagtgcttattgcggcggtctttatgtcgctgctcttcaagctgcgtctgcg
tttgctactattgttggggaaaacgctgtcgcgttttacttcaacgcaaagtatgaaaag
gcgaaaaccgtttacgagaagctgtggaacggttcttacttcgattatgataacagcggt
agcgactcgagctcctcgattcttgctgatcagttggctggacaatggtacgcgagagcg
tgcggactgaagccaataacgaaagaagagtggataaagaaagcactcgagacgatccat
gagtttaatgtgatgaaggtaagaggagggacacgtggcgctgtgaatgggatgtctccg
gatggacaagtggacacgaactcgctggtttcgaaagaggtttgggctgggaccacttac
tctgttgcagcttgtatgattcaagaaggacaaagagagaaagggtttcagacagcaagt
ggaatctatgaggctgtttggtctgatcgtggtctcagttgctcttttcagacaccagaa
gcgtggaacatgaatgatgaatacaggtctctctgttatatgagacctcttgctatatgg
gctatgcaatgggcattgacaccaatacaaacttttggaggagagaagcagaacttgatg
gcgggagatgaagacgaaagtgatttgttgttaagacagcacaatgggtttaaagaagtg
gctcgttatgtgaaaatagcaaagagcactgaacatagaagccttctccaagaaaagtac
gaggccatcctcacgacatttcacttgtag
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