KEGG   Brassica napus (rape): 106387692
Entry
106387692         CDS       T04128                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106387692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106387692
   04121 Ubiquitin system [BR:bna04121]
    106387692
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    106387692
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    106387692
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106387692
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 106387692
NCBI-ProteinID: XP_013683050
UniProt: A0A078FV97
LinkDB
Position
C9:56951058..56956345
AA seq 815 aa
MEVEKSKSRHESREERADNKRSPSRESRDGRRKEKDYRSKDKEKDYDREKNRDKDHRRDK
EKERDRKRDKEGDTEKEKSRDWDRERERDRDRAKDKEREKERDKHRDREKEKLKEKSKEK
DKEAYKDKDRSRVKDRSSKKSYEDEDENEKPAEIKDHYDNRGSNESEDNADAAPSGKEQS
ATEVEERIKKMKEERKKKAEEASDALSWVARSRKIEEKRNAEKQRAHQLSRIFEEQDNLI
QGENEDGEDGDHLSGVKVLHGLEKVAGGGAVILTLKDQSVLADGDVNNEIDMLENVEIGE
QKRRNEAYEAAKKKKGIYDDKFNDDPGAEKKMLPQYDEPDTDEGIILDAKGRFTGEAEKK
LEELRKRIQGQTTSTFEDLNSSAKVSSDYFSHEEMLRFKKPKKKKSLRKKDKLDISALEA
EAIASGLAAEDLGSRKDGKRQALIEEKERSEYEKRSNAYQTAIAKADEASRLLRMEHVQP
TKREEDELADDAEDLYKSLERARKLALTKKEEVRSGPEALAHLLASRTNETTDDNSSSGA
ETQENTMVFTEMNDFVWGLERGEGVGKPESEDVFMDEDEAPKAPEEVKEEQPDGWAEVKD
TYMDEAELASDTKEITPDETIHEVAVGKGLSGVLKLLKDRGALKEKVEWGGRNMDKKKSK
LVGIVDDEGGKERFKDIRIERTDEFGRTLTPKEAFRLLSHKFHGKGPGKMKEEKRMKQYQ
EELKLKQMKNSDTPSLSVQRMREAQAQLKTPYIVLSGNVKPGQTSDPQSGFATVEKDVPG
SLTPMLGDRKVEHFLGIKRQSEAGNSNSPAKRPKH
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggaagtggagaagtctaaatcaaggcatgaaagcagggaagagagggctgataataag
cggtctccttctagagaaagcagagatggaaggaggaaggagaaggattacaggagcaag
gataaagaaaaggactatgaccgtgagaagaacagggataaggaccatcgaagggataag
gagaaagaaagggaccgaaaaagggataaagaaggagacaccgagaaggaaaagagcaga
gattgggatagagagagggaaagggatagagatcgtgcaaaggataaggagagggaaaag
gaaagagataagcatagagacagagaaaaggagaagttgaaagagaagtctaaggaaaag
gacaaggaagcgtacaaagacaaggataggtcgagagttaaggatagatcgagtaagaaa
agctacgaggatgaggatgagaatgaaaaacctgcggaaataaaagaccattatgacaac
agaggttcgaatgaaagtgaggataatgctgatgctgcaccaagtgggaaagagcaatct
gcaacggaagtcgaggagcgcattaagaagatgaaagaagaaagaaagaagaaagctgaa
gaagcttctgatgctctatcatgggttgcaaggagccgtaaaatcgaggaaaaaagaaat
gctgagaagcaaagagctcatcagttgtccagaatttttgaggagcaggacaatctgatt
caaggtgaaaatgaagacggcgaggatggtgatcatctatctggtgttaaagttctacat
ggtttggagaaggtggcgggaggtggagcagttattttgacactgaaagaccagagtgtc
cttgccgatggagatgtcaacaatgagattgacatgctggaaaatgtggaaattggagaa
cagaagcgtcgaaacgaagcttatgaagcagccaagaagaaaaagggaatatatgatgat
aagtttaacgatgatcctggggcagaaaagaagatgcttccgcagtatgatgagcccgat
actgatgaggggataattttggatgcaaagggtcgctttactggtgaagcagagaagaag
ctggaagagctgcgtaaaagaatccagggtcaaacgacaagtacttttgaagacctcaac
tcgtcagcaaaggtctcatcagattacttctcacatgaagaaatgctacgttttaaaaaa
ccaaagaaaaagaaatcattgcggaaaaaagataaattggacataagtgcacttgaagca
gaagctattgcatcaggactggcagctgaggatcttggttctcgcaaagacggcaaaagg
caggccttgatagaagagaaagaaagatccgagtacgaaaaacggagcaacgcctatcag
accgccattgctaaagctgatgaggcatccagattactcagaatggaacacgttcagcct
actaaaagagaagaagatgagttggctgacgatgctgaagatctttataaatcgttggag
agagctcggaagttagctctcacaaagaaagaggaagttagatctggtcctgaagcactt
gcacatctactggcttccagaaccaatgaaacgaccgatgataatagcagctctggagct
gagacacaagaaaatacaatggttttcacagagatgaatgattttgtctggggtctcgag
cgtggtgaaggtgtggggaagcctgagagcgaagatgttttcatggatgaagatgaagca
cccaaagctcccgaagaagtaaaagaagagcaaccggatggttgggcagaagttaaagac
acttatatggatgaagcagagcttgcatcagataccaaagagataactcctgatgaaacc
atacacgaggttgcggttgggaaaggattatctggtgtattgaagcttcttaaagacaga
ggagccctaaaggagaaggtcgaatggggtggtaggaacatggacaaaaagaagagcaag
cttgttggtatcgtggatgatgaaggaggtaaagagagattcaaggatatccggattgag
aggactgacgagtttggtagaactttgactccaaaagaagcatttcgactactctctcac
aaattccacgggaagggacctggaaagatgaaggaagagaaacggatgaaacagtaccag
gaagagctcaaactaaagcaaatgaaaaactcagacacaccatcgctttctgttcagaga
atgagagaagcgcaagcgcaattgaaaactccttacattgttctcagtggcaatgtcaaa
ccaggacaaactagtgatcctcagagcgggtttgcgactgttgagaaggatgttccagga
agcttaacaccaatgcttggtgacagaaaggtggagcatttcttgggaataaaacggcaa
tcagaggctggaaactcgaattcaccagcgaagagaccgaagcattga

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