Brassica napus (rape): 106390364
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Entry
106390364 CDS
T04128
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106390364
Transcription machinery [BR:
bna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106390364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
106390364
NCBI-ProteinID:
XP_013686267
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Position
A2:complement(14524699..14527655)
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AA seq
492 aa
AA seq
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MMATTAVVGLNAGKRLLSSSFYYSDVTEKFLSVNDLCSSQYYYHIASTRSGITAKKTSSS
SSSSNYSPSFHSSSRHTQSAKALKESVDVVQQWLPPGSDQELEEESHEYEDDDTVEALLL
LQRSLLEKQWNLSFEKKKKKILVTCSGISARQRRMGAKKKTNIKVVNSDLFQNNRVKGGY
VKGVISDDVLSHTEVVRLSKKIKSGLRLDEHKSRLKDRLGCEPSDEQLAVSLKISRAELQ
AWLMECNLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFR
ISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGVTPSIDRIAESL
NMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNRLENNPWHGYDEWALKD
EVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAA
RKSKMEAMILKN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacaacagctgttgtaggactcaacgcagggaaaagactgttgagttcttcc
ttttactactccgacgtcaccgagaaatttctatctgtaaatgatctttgttcatcacag
tactactaccatattgcttcaacaagaagtggaatcactgcgaaaaagacatcatcatca
tcatcatcatccaactacagtcctagctttcactcatcaagtcgccacacacaatctgcc
aaggctcttaaggagagcgtggatgttgtgcagcaatggctacctcctggatctgatcag
gaattggaagaggaaagccacgagtacgaggatgatgacaccgttgaggcactcttgttg
ctgcagaggtctttgttagaaaaacagtggaatctttcctttgagaagaagaagaagaag
attctggtgacgtgttcagggatttcagctcggcaaaggagaatgggtgctaagaagaaa
actaatattaaagtggttaattcagacttgttccaaaacaaccgtgtcaagggtggttat
gtgaagggtgtcataagtgacgatgttcttagtcacactgaagtcgtgcgcttgtccaag
aaaatcaaatctggccttcgtcttgatgagcataagtcaagattgaaggatagattaggg
tgtgagccttctgatgaacagcttgcagtatccttgaagatatctcgtgccgagctgcag
gcatggttgatggaatgtaatctagctagggagaagttagctatgagcaacgttcgtttg
gttatgtctattgctcagcgttacgataatatgggagcagaaatgtctgaccttgttcag
ggtggtcttatcggacttttgcggggaatagagaaatttgattcttccaaaggtttcaga
atctcaacttatgtatactggtggattcgacagggtgtctcaagagcattagtggacaac
tcacgaacattgaggttgcctactcacctgcatgaaaggctaggtctaatccgaaacgca
aagcttagacttcaagagaaaggagtcacaccctccattgatcggattgcagagtcacta
aatatgtctcagaagaaagttagaaatgcaacagaggctgtaagcaaaatattttcccta
gacagagatgcattcccttctttgaacggtctccctggagaaacccaccacagctacatt
gcggataatcgtttggagaacaatccgtggcacgggtacgatgagtgggcactcaaggat
gaagtgagcaagcttataagtgcaacacttggagaacgggaaagggaaattattaggtta
tactatggtctagacaaagaatgtctcacatgggaagacattagcaaacggataggatta
tcgagagagagggttagacaggtggggcttgtggcgctcgagaaactaaaacacgcagca
aggaagagtaaaatggaggcaatgatcctcaagaattga
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