Brassica napus (rape): 106391673
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Entry
106391673 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106391673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106391673
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106391673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
106391673
NCBI-ProteinID:
XP_013687825
UniProt:
A0A078FNQ5
A0ABQ8A549
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Position
C4:complement(60689605..60694144)
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AA seq
863 aa
AA seq
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MANDQEMSGWTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNDYMMKVLEEDWRKEKRDFLQSLSRISMLPKTNMVDASREANAGQLVPVASS
TRGVSSTLGKELVALANIPIHEKKAYVYGEVVKKLNMSRERGLPFKPAMSFKEAYESLGA
EGTHGKSVNIQKIWQLVQAITGEDSAVRQGVSKRMSLAIGARRHLERGHEKHIMDTIQSH
PTQAALGGSVGNLQRIRAFLRIRLREYGTLDFDSPDARRQPPVDTTWQQIYFCLRTGYYE
EAKEIARSTRSSQQFAPLLTEWITKDGMVAAETAAIASEECEKMLRMGDRLGRTAYDKKK
LLLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLACIKDVSGASSSSVVLNDGLAPYS
LDDLQTYLNKFEPSYYTKNGKDPLVYPYVLLLSVQLLPAIMHLSKEAGDGGYNIDAVHIA
ISLVDHSVLSEGSGTGHKLSVMDANAEASSMVRQYGSMFLHHGDLQMTVEYYAQAAVTVG
GGQLAWSGRSNTDQQRQRNLMLKQLLTEILLREGGIYFLLGGRGSGEEGQLGRFFPDSRL
RQQFLIEAAHQCQEAGLYDKSIEIQKRVGAFASALETINKCLSEAICSLARGRLDGESRT
SGLILAGNDILQTYKYYPEVSLQEGERVMEQETILRELEAILSIHKLARQGNHMDALREI
AKLPFLNLDPRVPDATADVFQSASPYFQTCVPDLLKVALTCLDNVPDPDGSIRAMRSKIA
GFLASNTHRNWPRDLYEKVARSF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaagagatgagtggctggaccgatcttctccactcttcgtcgaagctt
ctcgagcaagccgctccttcctctcaatttcctcctcttcagaggaacttggatcaattg
gaagcgttatcgaagaagctaaaggctaaaaccctaaggaacgaagctccttctcagtct
attgccgccactaggctactcgctcgggagggaatcaatgctgagcagctagctcgtgat
ctcaagtcttttgagttgaagacaacgtttgaggatgtgttccccgctgaggctactagc
gttgaagaatacctgcaacaggttcatgaaatggctatggtatcggctatacaggaagct
caaaaggataatgttcgaagctttaatgattacatgatgaaagtgctggaggaggattgg
agaaaagaaaaacgtgacttccttcaaagccttagcagaatatcaatgttacctaaaacg
aatatggttgatgcaagcagagaggctaatgctggtcaactagtgccggtggcttcgagt
actcgaggagtatcgtccacactaggcaaagagcttgtggctctggctaatatacccatt
catgagaaaaaagcatacgtctatggagaggttgtgaagaaacttaacatgtcaagagaa
agaggcttgccatttaaacccgcaatgtcttttaaggaagcttatgaatctcttggtgct
gagggaactcatgggaaatcagtcaacatccagaaaatatggcagcttgttcaggcaata
acaggtgaagactcggcagttcgacagggtgtttcgaagaggatgtccctcgcgataggt
gcaagacgtcatttagaacgtgggcatgagaaacatataatggacacaattcaaagtcac
cctacacaggctgctcttggtggatctgttggaaatttgcaaagaattcgtgcgttcctt
aggattcgtttgagagaatatggaactttagattttgattcacctgatgcccgtaggcag
cctcctgttgatacgacttggcaacagatatatttttgcttgcgtactgggtattatgag
gaggctaaagaaattgcccggtcaactcgttcatctcaacagtttgcaccactgcttaca
gagtggattacaaaagatggtatggtggctgcagagactgcagctattgcatcagaagaa
tgcgagaaaatgctgagaatgggtgatcggttgggcagaaccgcatacgacaagaagaaa
ctcctactctacaccatcatctctggttcccgcaggcaaatcgagcgcattctgagggat
ctgtctacactcttcaacaccatcgaagacttcttatggttcaaattagcatgcatcaaa
gacgtttctggtgcatcttcttcatctgtggtcttgaacgatggcctggcgccgtacagt
ttagacgatctccagacctatctcaataaattcgagccttcatactacacgaagaacgga
aaagaccccttggtgtatccatatgttttactcctcagcgttcagttgcttcctgctatc
atgcacttatccaaagaagcaggagacggagggtataacatcgatgctgttcatatagct
atctctctagtggaccattctgttttgtctgaaggctccgggacaggacacaaactcagc
gtgatggatgctaatgcagaggcgtccagtatggttaggcaatacgggtccatgtttctg
caccacggagatctccagatgacagtagagtattacgcacaagctgctgttacggtaggt
ggggggcagctagcttggtccggaagaagtaacacagatcaacagaggcagagaaactta
atgctgaagcagctattgactgagattctcctgcgagagggtggcatctacttcttgctt
ggcggaagaggctctggtgaagaaggtcaacttggaaggttcttcccggactctagattg
agacagcagttcttgattgaagctgcacatcaatgtcaggaagctggattgtacgacaaa
tccatagagatacagaagagagtgggtgcttttgcatctgccttggagactataaacaag
tgtctctctgaagccatttgctccctggcacgtggaaggttggatggtgaaagcagaaca
tcagggctgattcttgccggaaacgatattctccagacttacaaatattaccctgaagtc
agtcttcaggaaggagagcgagtgatggaacaagaaacgatactaagagagctggaggcg
atactatcgatccacaagttggctagacaaggcaaccatatggatgctctgagggaaatt
gcgaaacttccgttccttaatcttgatccaagagtgcccgatgcaaccgctgatgtgttc
cagagcgcgtctccttacttccagacttgtgtcccggacctgctcaaagttgcgctgact
tgtctggacaatgtacctgatcctgatggatcaatccgtgccatgagatccaagatcgct
gggtttcttgcaagcaacacgcacaggaactggcctcgtgacttgtacgagaaagtggct
cgaagcttttga
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