Brassica napus (rape): 106394370
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Entry
106394370 CDS
T04128
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106394370
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106394370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCD
STAG
PDS5
Motif
Other DBs
NCBI-GeneID:
106394370
NCBI-ProteinID:
XP_048609487
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Position
C4:386568..392207
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AA seq
1100 aa
AA seq
DB search
MEGAKRRRDQDQDQDQDDDSGGENQNQNQNQKQERSASEDQKSPELDDDDFQETRPQSKR
SRTLPPHQNLIEVVKGNVDLIPKAVKIWVERYENSPNLATSQLLSMLFEACGAKYSIKED
LLDETDVDDVVVALVNLARSGEIEDYHTSRKKEHKNFKENLVSFWNYLITESQNGPLFDK
VLFDKCMDFIIALSCTPPRVYRQTATLMGLQLVTSFISVANTLGSQRETTQRQLNAETKK
RPDGPLLDSLNKRLSLTHQHITTLEDMMRKIFTGLFVHRYRDVDPDIRMSCIQSLGIWIS
SYPSLFLQDLYLKYLGWTLNDKAAGVRKASLLALRKLYEMDENVPTLGLFTERFSNRMIE
MADDVDLSAAVCAIGLVKQLLRHQLIPDDDLGPLYDLLIDQPQEIRRAIGELVYDHLIAQ
KFNSSPSGLTGHDDSSSEIHIFRMLQILREFSTDPILSVYVIDDVWEYMKAMKDWKCIIS
MLLDQNPRTGSTTDEDSTNLVRLLFASIRKAVGEKIIPSTDNRKQYHSKAQREMFENNRK
DITVAMMKNYPQLLRKFMADKAKVSSLVEIVMFMKLELYSLKRQEQTFKAAVRLIKDAFF
MNGEKEALRSCVKAITFCASESKGELQDFSRGKLKDLEDTLFDKLTSAIKEVKDGNDEYS
LLVNLKRLYELQLLKPVLGESMYDELAMTLHDFRNLDEEVICFLLLNMHMYVVWSLHSVV
NCETVSEASLSSLISKRDILFAELTYFLNGVEESRKYGNQLALRICALLAEEWCLFRKST
FESSKLEMLGYCPESVILKKFWKLCEEIFNTSDETDEEDENKEYVAETNRDVAAIAACKL
VNCGVVPKDYLGPEIISHLVMHGPSVTEVIKNLITCLRKTEDDISSIYMESLKRGYQRYE
SELSCDGGESRVEKCLQVCRELAGRLSGMYVGAARNKHRLEILSVVKEGVEFAFRDAPKQ
MLFLEVAILPFATRLSVPDIIDIKREVQGRMVHVNTDEDPSGWRPCFTFLETLEEKCLKT
EDVQDDKEGVAVKRKGRPKKRAETERKRLFDEESGSDDDESISGGSDKEDKGDFVDEDAP
LIETIRSAARRRAVRGERSK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgctaaaaggagaagagatcaggatcaggatcaggatcaggatgacgacagc
ggcggagagaatcagaatcagaatcagaatcagaaacaggagcggagcgccagcgaagac
cagaaaagcccagagctcgatgatgacgatttccaggaaacccgtcctcagtccaagcgt
agtcgcacccttcctccccatcagaatctcatagaggttgtgaaagggaacgtggatctt
attcctaaagccgtcaagatctgggttgaaagatatgaaaactctcctaaccttgctacc
tctcaactcttgtccatgctctttgaggcttgcggtgctaaatactccatcaaagaagac
ctgcttgatgagactgacgtcgatgatgttgtcgttgctcttgttaatcttgctagatcc
ggggaaattgaagattatcacacttctagaaagaaggagcacaagaacttcaaagaaaat
cttgtttctttctggaattacttgattaccgagtcccagaatggacctttgtttgataaa
gtcttgtttgacaagtgcatggacttcattatcgcactctcatgtactcctcctcgagtt
taccgccaaactgccacgcttatgggtctccaactagtcacttcctttatttctgtagcc
aacactctcggttcccagcgtgaaaccacccaaaggcaattgaatgctgaaaccaagaaa
agacctgacggccctcttcttgactccctcaacaaaaggttgtctcttactcaccaacac
attactactttggaggacatgatgcgcaaaattttcactgggttgtttgtacaccgatat
cgagatgttgaccccgatattaggatgtcatgcattcagtctctgggcatttggatctct
tcttatccttctcttttcttacaagatctctacttaaagtatcttggatggacgcttaat
gacaaagctgccggagtgaggaaagcttctctcctggcattgcgaaaactttatgagatg
gatgaaaacgtccccactcttggtctattcactgagagattttccaatcgaatgatcgag
atggctgatgatgttgatttgtctgcagctgtctgtgctataggccttgtaaagcagttg
ctaagacaccagctgattcctgatgacgaccttggccctttgtacgatctacttattgat
caaccccaggaaattagacgtgccattggagagttagtgtatgaccacttgatcgcacaa
aagttcaacagttctccatccggtcttacaggtcatgatgattcttcctctgagatccat
atcttcagaatgttacaaatattacgggagttttccacagatccaatcttaagcgtttat
gtaattgatgatgtttgggagtacatgaaggccatgaaggactggaagtgtatcatctct
atgcttttggatcagaatcctcggactgggtctactactgacgaagactcaacaaacttg
gtcagacttctgtttgcgtcaatcagaaaggctgtcggagagaagataatcccttcaacg
gataatcgaaagcagtatcacagtaaagctcagcgagaaatgtttgagaacaacaggaaa
gatataacggttgcaatgatgaagaactatccacaacttctacgtaaattcatggctgac
aaagcgaaagtgtcatctctggtggagattgttatgtttatgaaactcgagctctattct
cttaaacgacaggagcagacttttaaggccgccgtccgattgattaaggatgcgtttttc
atgaacggggagaaggaagcactaagatcttgcgttaaggctataacattttgtgcgtcg
gaaagtaaaggggaacttcaagatttttcccgtgggaagcttaaagatcttgaagatacg
cttttcgataaactcacttctgcaattaaagaagtcaaggatggaaatgatgaatactcc
ctccttgtaaatctgaaaaggttatatgagcttcagttgttaaagcctgttcttggtgag
agcatgtacgatgagcttgctatgacgctccatgatttcagaaatttggacgaagaggtt
atctgttttctcctcctgaacatgcatatgtacgtggtgtggtctctgcactccgtcgta
aattgtgaaactgtctccgaagcttccttatcttcccttatatcaaaacgcgatatcctg
tttgcggagcttacttacttcctaaatggagttgaggaatcgagaaaatatggtaatcag
ctagctctcaggatttgtgctttacttgcggaagagtggtgtctttttagaaagtcaact
tttgagtctagtaaacttgaaatgttaggatattgtccagagagtgttattctcaagaaa
ttttggaaactctgtgaagaaatttttaacacatcagatgagactgatgaggaggatgaa
aataaggagtatgttgctgagacgaacagagatgttgcagccattgctgcctgcaagttg
gttaattgtggtgtggtgccgaaggactatctaggaccagagataatatctcatcttgtt
atgcatggacctagtgttacagaagtcataaagaatcttataacatgcttaaggaaaaca
gaagatgacatctccagtatctatatggaatccttgaaaaggggatatcaacggtatgaa
agcgaactttcttgtgacggtggagaatcaagagtggaaaaatgtcttcaagtgtgccgg
gagcttgctggtcggctatcaggaatgtatgttggtgctgctcgcaacaaacacagactg
gagattttgagcgtggtcaaggaaggtgttgagtttgcatttagggacgcaccgaaacaa
atgttgtttttggaagttgctatccttccatttgcaacgagactctcagtgccggacatc
attgacattaagagggaggttcaggggcgtatggtgcatgttaatacagatgaagacccc
agcggatggcgtccttgctttaccttcttagaaacattggaggagaaatgcttaaaaacc
gaggatgtacaagacgacaaggaaggagtagctgtaaaacgaaagggacggcccaaaaaa
cgtgctgaaacagagcgaaagagactgtttgatgaggaaagcggaagcgatgacgatgaa
tccatcagtggtggctcggacaaagaagacaagggagattttgtagacgaggacgctcct
cttattgagacaatcaggtcggctgcaagacggagggcagtaagaggagaacggtccaag
tga
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