Brassica napus (rape): 106411334
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Entry
106411334 CDS
T04128
Name
(RefSeq) structural maintenance of chromosomes protein 4-like
KO
K06675
structural maintenance of chromosome 4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106411334
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
106411334
Condensin II
106411334
BRITE hierarchy
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GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
CCDC113_CCDC96_CC
DUF4795
FlaC_arch
Ubiq_cyt_C_chap
Laminin_II
ABC_tran
DASH_Dad4
Motif
Other DBs
NCBI-GeneID:
106411334
NCBI-ProteinID:
XP_013707536
UniProt:
A0A816N4H4
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All DBs
Position
C7:40578707..40586662
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AA seq
1246 aa
AA seq
DB search
MEEEEPTGEFRGESQPEQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNG
SGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDKEDGSYE
TVPGSDFMITRVAFRDNSSKYYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQIS
LMKPKAQGPHDEGFLEYLEDIIGTNKYVEKIDELNKELETLNEKRSGVVQMVKLAEKERD
NLEGVKDEAETYMLKELSYLKWQEKATKMAHEDTLAKITEQKESLQNLENSLKNDREKMD
ESNKELKELESVHEKHKKTQEGLDNELRECKEKFKEFERQDVKHREDLKHVKQKIKKLED
KLQKDSSKINDLTKECEDSRNLIPKLQENIPKLQEVLVDEEKALEEIKEKAKVETEGYRS
ELTKIRAELEPWEKDLIVHKGKLDVASSESELLSNKHEAALKAFTDAQKQLTDISGRKEE
KSAATTSIKADIEKKKLEATEARKVEEESHREQETLIPQEQAAREKVAELKSAMISERSQ
GDVLKAVLRAKENNQIEGIYGRMGDLGAIDAKYDVAVSTACGGLDYIVVETTSAAQACVE
LLRKGNLGVATFMILEKQTNHLQRLKERVKTPEDVPRLFDLIRVKDERMKLAFYASLGNT
VVAKDLDQATRIAYGGNREFQRVVTLDGALFEKSGTMSGGGGKPRGGRMGTSIRATGVSG
EVVANAENELFKIVDMLNHIREKIGNAVRQYRAAENEVSRLEMELAKSQREIESLNSEHN
YLEKQLASLEAASQPKTDEIERLKELKKIISKEEKEIEKLEKGSKQLKEKALELQTSIEN
AGGENLKGQKAKVEKIQADIDKSNTEINRCNVQIETHQKMIKKLTKGVEDGTREKERLEG
EKEKLLTVFKSIEQKAFAIQEKYKETQKLIDEHKDVLTEAKSNFEKLKKSVDELKASRVD
AEFKVQDMKKKYNELELKEKGYKKKLNDLQIALTKHMEQIQKDLVDPDKLQATLMDNNLN
EACDLKKSLEMAAVLEAQLKELNPNLDSIAEYRSKVELYNGRVDELNSVTQERDDIRKQH
DELRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKS
WKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA
QFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVSQKTPA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagccaacgggtgagtttcgcggcgagtctcagcctgagcagaggaaa
tctggaactccgaggctttacatcaaagagcttgtcatgaggaacttcaaatcatacgct
ggtgaacaacgcgtcggacctttccacaagagtttttctgcggtggttggacctaatggg
agtggaaagagcaatgtgatagatgcaatgctctttgtatttgggaaacgagctaagcag
atgcggctcaacaaagtgtctgaactaattcacaactcaaccaatcaccagaacttggac
agtgctggggtttctgtacagttcgaagagattattgataaggaagatggctcctacgaa
actgttcctggaagtgatttcatgattacccgggttgcattccgagataattcttccaag
tattatatcaatgaaaggtcgagcaatttcactgaagttaccaaaaagttgaaggggaag
ggagtagatcttgacaacaaccgtttcttgattcttcagggggaggtagagcagatatca
ctcatgaagccgaaagcacaaggtccccatgatgaaggttttcttgaatatctcgaggat
attattggaacgaataaatacgtggagaagatagatgaattaaataaggagcttgaaacc
ctcaatgaaaagcggtctggagttgtacaaatggtgaaactagcagagaaagaaagggac
aatttagagggtgtgaaggatgaagcagagacttacatgctgaaagagctatcttatctt
aaatggcaagaaaaggctacaaaaatggcacatgaagatactttagctaaaattaccgaa
cagaaagagagcttgcagaatttggaaaacagtctaaagaatgatcgagagaaaatggat
gagagtaataaggaattgaaggaactagagtctgtgcatgaaaaacataagaagacacaa
gagggtcttgataatgaacttcgagagtgtaaggagaagttcaaagagtttgaaaggcag
gacgtaaagcacagggaggatttgaagcatgtgaagcaaaaaatcaagaaattagaggat
aaacttcaaaaggattcatccaaaatcaatgatttgacaaaggagtgcgaggactcgaga
aatcttatacctaaacttcaggaaaatataccaaagctgcaggaggtcctggtagacgag
gagaaggcactggaggaaatcaaagagaaagctaaagttgaaactgaaggttaccggtct
gagcttacaaaaattcgtgctgaattagaaccttgggaaaaagatctaattgtccacaag
ggaaagctggatgttgcatcatccgaaagtgagctcttgagcaataagcatgaagctgct
ctgaaggccttcacagatgctcagaaacagctcactgatatatcagggaggaaagaagaa
aaatctgcagcaactacttctattaaagctgatatagagaagaagaaacttgaagcaacg
gaagctcgaaaagtcgaagaggaatcacatagagaacaagaaactcttattccacaagag
caggcagccagagaaaaagtcgctgaactaaagtcagctatgatttctgagaggagtcag
ggtgatgttttgaaggcagttttacgagccaaggagaacaatcaaattgaaggaatatat
ggaaggatgggggacttaggtgccattgatgcaaaatacgatgttgccgtatcaactgct
tgcggtggccttgattacattgttgtggaaacaacgtctgccgctcaggcatgtgtcgag
ctgctgcggaagggaaatcttggcgttgcaacgtttatgatattggagaaacaaaccaat
catttacaaagattgaaggagagagtgaagacacccgaggatgttccacgcctctttgat
ctgattagagttaaggatgagaggatgaaacttgcattctacgcatccttgggaaacact
gttgtggcaaaagatcttgatcaggcaacacgtattgcatatggtggtaacagagaattt
caaagggtcgttactcttgacggtgctctctttgaaaaatctggaaccatgagtggaggt
ggaggcaagccacgtggaggaagaatgggaacctctatccgagccactggtgtgtctggc
gaagttgttgctaatgctgaaaacgagctcttcaaaattgttgacatgttaaaccacatc
cgtgaaaagattggcaatgcggtgagacaatatcgggctgcagaaaacgaagtctctcgc
ctcgagatggagctggcgaaaagccaaagggagatcgaaagtctcaactcagagcataat
tacctggagaaacaactagcttccctggaagctgcatctcagccaaagacagatgagata
gagaggcttaaagagctcaagaaaatcatctccaaagaagaaaaagagattgaaaaactt
gagaagggttctaaacagctgaaggaaaaagctttggagctgcaaaccagcatagagaac
gctggtggggaaaatctgaaaggacaaaaggcaaaggttgagaagattcaagccgacatt
gacaaaagtaatacagagatcaatcgatgtaatgttcaaatagaaacacaccagaaaatg
ataaagaagttaacaaagggggttgaagacgggactcgagagaaagaaaggctagagggt
gagaaggaaaaattgctgacggttttcaaatctatagaacagaaagcatttgcaatccaa
gagaagtataaagaaacacagaagttgattgatgaacataaagacgtgctgactgaagca
aaatccaattttgagaagctgaaaaagtctgtggatgagttgaaggcatctagggtcgat
gcagaattcaaagttcaagatatgaaaaagaagtacaatgaattagaattgaaagagaag
ggctacaagaagaaactcaacgacttgcagattgcactcacaaagcatatggaacaaatt
cagaaagatcttgttgatccggataagcttcaagcaacattgatggataataatttgaac
gaagcttgtgatctaaaaaagtctcttgaaatggctgccgtactggaggctcagctgaaa
gagctgaatccaaatcttgactcaatcgcggagtatcggagcaaagtggaactttacaat
gggcgggtagatgaacttaactctgtaacccaagaacgtgatgacataaggaagcagcat
gatgaattgagaaagagaaggttggatgagtttatggcaggatttaacacaatatcgtta
aaactgaaagaaatgtatcagatgatcactctcggaggtgatgcagagctcgagcttgta
gactcgctggaccctttctcagaaggtgtggttttcagtgtgagacctccaaagaagagc
tggaagaacattgcaaacttgtccggtggtgaaaagacactgagctcactcgcactagtc
tttgcactccatcactacaagcctacaccgctttacgtcatggacgaaatcgacgccgct
ctcgatttcaagaacgtatcaatcgttggacactacgtgaaggaccgtactaaagatgct
cagttcattatcatcagtctgaggaacaacatgtttgagctagcagatagattggtggga
atctacaaaacagataactgcacaaagagcattactatcaaccctggaagctttgcagtt
tctcagaaaacgcctgcttaa
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