Brassica napus (rape): 106418780
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Entry
106418780 CDS
T04128
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106418780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106418780
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106418780
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Sigma70_ner
CDC45
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
106418780
NCBI-ProteinID:
XP_013714991
UniProt:
A0A816KDK3
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Position
C2:12112287..12114787
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AA seq
365 aa
AA seq
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MQEIISDFLEECEFVDTSLAGDDLFAILESLEGAGEISSTPASTPRDGIASLNELVKDQI
HETSSPKRNKRKRLETDKEEDEEEDGEGEGEGEEDNKQDGEQKMSHVTVERNRRKQMNEH
LTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVSSP
RPSPPVLSPRKPPLSPRINHLQIHHHLLPPISPRTPQPTSPYRAHPPQLPLIPQPPLRSY
SSLASCSTLGDPLPYSPASSSSSPSVSSNHESSMINELVANSKSALADVEVKFSGANVLL
KTVSHKIPGQVMKIIAALEDLALEILQVNINSVDETMLNSFTIKIGIECQLSAEELAQQV
QQTFC
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagataatatcggattttcttgaagagtgtgaattcgttgacacttcactagcc
ggtgatgatctatttgctatcttagagagtcttgaaggcgccggagagatatcctccacg
cctgcatctacacctagagatggaatcgcaagtttaaacgagttagtaaaggatcaaatc
catgaaacttcatctcctaagaggaataagaggaaaagactagaaaccgacaaagaagag
gacgaagaagaagacggagaaggagaaggggaaggggaggaagataataagcaagatggg
gaacaaaagatgtctcatgtaaccgtggaacgtaacaggagaaagcaaatgaatgagcac
ttgacggttctacgctctcttatgccttgtttctacgtcaaacggggggaccaagcatcg
attataggaggagttgtggaatacataagcgagctacaacaagttcttcaatctttagaa
gccaagaaacaacgtaagacctacgcggaagtcctaagcccgagactagtctcgagccct
cgtccttcaccgcctgtcctaagcccgcgaaaaccgcctcttagtccgcgcatcaaccac
cttcagatccaccaccacctcctccctcccataagccctcgaacccctcagcccacaagc
ccataccgagcccatccgccgcaactaccactcatcccacagcctcctcttcgttcttac
agctcattggcaagttgtagcaccttaggggatccacttccatactctccagcttcatct
tcttcctctccttcagttagtagtaaccatgagagtagtatgataaatgagctcgttgct
aactcaaagtcggctttggctgacgtggaagttaagttctcaggagctaatgtgctactt
aaaacggtgtcgcataagatccctggacaggttatgaagataatcgctgctcttgaggat
ttggctctcgagattcttcaggttaatattaactcggtcgacgaaaccatgcttaattct
ttcaccatcaagattggaattgagtgccaactaagtgcagaagaattggctcaacaagtt
cagcaaactttctgctaa
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