KEGG   Brassica napus (rape): 106419123
Entry
106419123         CDS       T04128                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106419123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106419123
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106419123
 Complex B
    106419123
 Complex C
   U2 SnRNP specific factors
    106419123
SSDB
Motif
Pfam: Surp ubiquitin DUF5780
Other DBs
NCBI-GeneID: 106419123
NCBI-ProteinID: XP_013715335
LinkDB
Position
A10:18179436..18182057
AA seq 534 aa
MSSSSQDDPNIDPEVRFIMEGTARLVAKHGVWMESRFLEDNVNNKLYNFLRIPNHPYLAF
YRNKIVEYRNAHQKQCIKPPCSTNYVAQPPVVEIKCPEGMNPNDFGVIKLTAQFVVRYGR
HFWPDLVNSVTMNPKPQFGFINASDCRFNVLLELVDAYAKLLMPYWKRPASKRNQHACTE
TFLQGFFNILQGKKHDEEEGVEIERDVVDVHDFAGCLDYFACSDDGKWKSPGRISAQMLS
DGMLDAPPTDDGAQGQPNPLFTYPPIPRDYPFTYPKGITRRQLGIIKVTAQFYVRYGYTF
LMALIRRVAIIENSQFEFIMSEDKYSFFYRLVTVYSNVLMPSCTCPERAVLKGFFNLLQG
ENQEVEVGVEMSESDLHSYVGALDYFANREDQELTSHGCFSSAPTQMRPCLPVPLPKGTQ
WLFLLRHCHYVRNQSHKDKLNKSALVPKDQFLVQHSGSVTIRVSFPNVNSEQVIEITLQS
LSENVASLKEKIARKIQIPANKHKLWGKAGFLKKDNMSLAHYCVGAGETLIMSL
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgtccagttcaagtcaggatgatccaaacattgatccagaagtcaggtttattatggag
ggaactgcacgtttggtcgccaagcatggggtgtggatggaaagcaggttcttggaggat
aatgtgaataataaactatacaactttctgaggatccccaaccatccttatctcgctttt
taccgaaacaagattgttgaataccgaaatgctcatcagaaacaatgtatcaaacctcct
tgttctactaattatgttgcacagcctccagttgtagaaatcaagtgtcctgaagggatg
aaccccaatgattttggcgttatcaaactcacagctcagtttgtggtgcggtatgggagg
catttctggcccgatttggtgaatagtgtgactatgaacccgaaaccccaatttggcttt
atcaatgcaagtgattgcagatttaatgttttacttgagcttgttgatgcttatgctaaa
cttttaatgccttactggaagcggccagcgagtaaacgtaaccaacatgcttgcacagaa
acatttctccaagggtttttcaatattcttcaagggaaaaagcatgatgaggaggaggga
gtagagatagagagggatgttgttgatgtgcatgattttgcgggatgtcttgactatttt
gcttgtagtgatgatggaaagtggaaatcgcctggacgcatttcagcacaaatgctgtct
gatggtatgcttgatgctccaccaactgatgatggtgcacaaggtcaacccaatcctcta
tttacgtatcctccaatacctcgcgattatccatttacatatcctaaagggatcacacgt
aggcagcttggtattatcaaggtcacagcgcagttttatgtgaggtatgggtatacattc
ttgatggctttgataaggagagtggctataatcgagaactctcagtttgagtttatcatg
tcagaagataagtacagttttttctatcggcttgtgactgtttattccaatgtactaatg
ccttcatgtacttgtccggagagagctgtcctcaagggtttcttcaatcttcttcaaggg
gaaaatcaggaggtagaggtgggagtggagatgtccgagagtgatttgcattcttacgtg
ggtgcgcttgactattttgctaacagggaggatcaagagttgacatcacatggatgtttt
tcatcggcaccaacacaaatgcgaccttgtttgcctgtgccgcttccaaagggaactcag
tggcttttccttctccgccactgccactacgtgaggaaccagagccacaaagacaagctt
aataagtcagcgcttgttccaaaagaccagtttctcgttcaacattcgggttctgttaca
atcagggtttcttttccaaacgtgaacagtgagcaagtcattgagatcactctgcagtcg
ttatcagaaaacgtggcaagtttgaaggagaaaatagctaggaagatccaaattccagca
aacaagcataagttatggggaaaagccggatttctaaagaaggacaacatgtcattggca
cattactgtgtgggagcaggagaaactctaattatgtctttgtga

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