Brassica napus (rape): 106419402
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Entry
106419402 CDS
T04128
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
bna
Brassica napus (rape)
Pathway
bna00531
Glycosaminoglycan degradation
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106419402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bna00536
]
106419402
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
106419402
Glycosaminoglycan binding proteins [BR:
bna00536
]
Heparan sulfate / Heparin
Enzymes
106419402
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Leu_Phe_trans
Motif
Other DBs
NCBI-GeneID:
106419402
NCBI-ProteinID:
XP_013715636
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All DBs
Position
A10:complement(17641987..17645763)
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AA seq
544 aa
AA seq
DB search
MGFKVCIFLLLLGCLLQVPERTMARDMKRASIVIQGASRIAETDENFVCATLDWWPHDKC
NYDNCPWGYSSVINMDLSRPLLTKAIQAFKPLRIRIGGSLQDQVIYDVGNLQTPCHPFRK
MNSGLFGFSKGCLHMKRWDELHSFLTKSGAIVTFGLNALHGRHKLRGNAWGGAWNHVNTQ
DFINYTVSNGYVIDSWEFGNELSGTGVGASVSAELYGKDVIVLRDIIDKMYKDSKLTKPL
LVAPGGFYEQQWYTKLLEISGQDVVDVVTHHIYNLGSGNDPQLVKKILDPSYLSRIAETF
KNVNKTIQEHGPWASPWVGESGGAYNSGGRRVSDTFIDSFWYLDQLGMSSKHNTKVYCRQ
TLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLSVQTDGPPQLRVYAHCSKGREGVT
LLLINLSNQSDFTVSVSNGVSVALNVESKHKKKSLLDTLKKPFSWIGNKASDGYLNREEY
HLTPENGELRSKTMVLNGKPLKPTETGDIPSLEPVIRGVNSPVCVSSLSMSFIVLPSFDA
SACS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaaagtttgcatctttctcctcctcttgggttgtctacttcaagttccagag
agaacaatggctcgagacatgaaacgtgcatcgatcgttatccaaggagctagtcgaatc
gctgagaccgacgagaactttgtctgtgccacattggactggtggccacatgacaagtgc
aactatgacaattgtccttggggttactcttcagttatcaacatggacttgtctcgtccc
cttcttactaaagctattcaagcctttaagccattgaggataagaatcggcggttcgctg
caagatcaagtgatctacgacgtaggaaatctccaaactccatgccatccatttagaaaa
atgaacagcggcttgtttggattctctaaaggttgcttgcatatgaaacgatgggacgag
ctccacagtttcctaaccaaatcgggagctatagtgacgtttggtttaaacgctttgcat
gggagacacaagctacgtgggaatgcatggggcggggcgtggaatcatgttaacactcaa
gatttcatcaactacacagtctcaaacggctacgttatagattcttgggaatttggaaac
gagctgagtggaaccggagtaggtgcgagtgtcagcgcagagctttacgggaaagacgtg
attgtacttagagatataatcgacaaaatgtataaagactctaagttaaccaagccttta
cttgtcgctcctggaggattctatgaacaacagtggtacaccaaacttcttgagatctct
ggtcaagatgttgtcgacgtggtgacacaccatatatacaatcttggttcagggaatgat
cctcagttggtaaagaagatactggatcctagttacttaagcagaatagccgaaacattc
aagaacgtgaacaaaacgattcaagaacacggaccgtgggcttctccttgggttggcgag
tctggtggagcttacaatagtggtggccgtcgtgtctctgatacattcatagacagcttc
tggtatctagatcagcttggaatgtcgtcgaaacacaacactaaagtgtactgcagacag
actttggtcggagggttttatggtctgctcgaaaagggaacttttgttccaaatccagat
tactatagtgcacttctatggcatcggttaatgggtaaaggtgttctttcggttcagaca
gatggaccacctcagctacgggtttatgctcattgttcaaaaggaagagagggtgtaacg
ttacttctgatcaatctaagcaaccaatcagatttcacggttagtgtcagcaatggtgtg
agcgttgctttgaacgtggaatcaaagcataagaagaagtcattgttggatactttgaag
aaacctttttcttggattggaaacaaagcttcggatggttacttgaacagagaagagtat
catctaacaccagagaacggtgagttgaggagcaagacaatggtcttgaatggcaaaccg
ttgaaaccgacagaaaccggagatatcccgagccttgaaccggttatccgtggagtgaac
tctccggtttgtgtctcgtcgttgtccatgtcgttcattgtgttgcctagttttgatgct
tctgcttgttcttga
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