Brassica napus (rape): 106419431
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Entry
106419431 CDS
T04128
Name
(RefSeq) transcription factor SPEECHLESS isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106419431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106419431
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106419431
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
106419431
NCBI-ProteinID:
XP_013715672
UniProt:
A0A816KDK3
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Position
A2:6479302..6482826
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AA seq
445 aa
AA seq
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MLVPHIYSFWHPLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSYFTIFLYP
TVRQNNELGRERVSKRFVVTMQEIISDFLEECEFVDTSLAGDDLFAILESLEGAGEISST
PASTPRDGIASSNELVKDQIHETSSPKRNKRKRLETDKEEDEEEDGEGEGEGEEDNKQDG
EQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVRQSLE
AKKQRKTYAEVLSPRLVSSPRPSPPVLSPRKPPLSPRINHLQIHHHLLPPISPRTPQPTS
PYRAHPPQLPLIPQPPLRSYSSLASCSTLGDPPPYSPASSSSSPSVSSNHESSMINELVA
NSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINSVDETMLNS
FTIKIGIECQLSAEELAQQVQQTFC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctagtccctcatatttactccttttggcatcctctctctctctctctctctctctct
ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctctctctctctctctctctctcttattttactattttcttgtatcca
accgtaagacaaaacaacgaactaggaagagagagagtgagtaagagatttgtagtcaca
atgcaagagataatatcggattttcttgaagagtgtgaattcgttgacacttcactagcc
ggtgatgatctatttgctatcttagagagtcttgaaggcgccggagagatatcctccacg
cctgcatctacacctagagatggaatcgcaagttcaaacgagttagtaaaggatcaaatc
catgaaacttcatctcctaagaggaataagaggaaaagactagaaaccgacaaagaagag
gacgaagaagaagacggagaaggagaaggggaaggggaggaagataataagcaagatggg
gaacaaaagatgtctcatgtaaccgtggaacgtaacaggagaaagcaaatgaatgagcac
ttgacggttctacgctctcttatgccttgtttctacgtcaaacggggggaccaagcatcg
attataggaggagttgtggaatacataagcgagctacaacaagttcgtcaatctttagaa
gccaagaaacaacgtaagacctacgcggaagtcctaagcccgagactagtctcgagccct
cgtccttcaccgcctgtcctaagcccgcgaaaaccgcctcttagtcctcgcatcaaccac
cttcagatccaccaccacctcctccctcccataagccctcgaacccctcagcccacaagc
ccataccgagcccatccgccgcaactaccactcatcccacagcctcctcttcgttcttac
agctcattggcaagttgtagcaccttaggggatccacctccatactctccagcttcatct
tcttcctctccttcagttagtagtaaccatgagagtagtatgataaatgaactcgttgct
aactcaaagtcggctttggctgacgtggaagttaagttctcaggagctaatgtgctgctt
aaaacggtgtcgcataagatccctggacaggttatgaagataatcgctgctcttgaggat
ttggctctcgagattcttcaggttaatattaactcggtcgacgaaaccatgcttaattct
ttcaccatcaagattggaattgagtgccaactaagtgcagaagaattggctcaacaagtt
cagcaaacattctgctaa
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