KEGG   Brassica napus (rape): 106426359
Entry
106426359         CDS       T04128                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106426359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106426359
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106426359
 Complex B
    106426359
 Complex C
   U2 SnRNP specific factors
    106426359
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Nuc_rec_co-act zf-C2H2_jaz
Other DBs
NCBI-GeneID: 106426359
NCBI-ProteinID: XP_013722532
UniProt: A0ABQ8A5K3
LinkDB
Position
C3:complement(1283963..1287188)
AA seq 510 aa
MSSTLLDQIRCNHEEIERLERLVVQDLQTQPSSSKDRLVQGHRVRNTIHSIMRTIEKLVE
TYEDKDGAREDEIAALGGRTASGVNVYCAFYDRLKEIREYHRKYPPGPLVDASADYEALL
KAKPVISFSGEEGAGRYLDLHDMYNQYINSKFGDRVEYSVYLDVFSHPEKVPRRLKFSRQ
YMKYMEALLEYLVNFLHRTEPLQDLDRMLSKVEVDFEEQFADGKVIGWESHGQESKLVPS
EHTVIDLGYYTTADELTGVGPEKLKEALGSLGLKVGGTLQQRAERLFLTKHSPLEKLDKK
HFAKPLHKGRQNGDAKATQEPDSAKQIALTEAKVKKLCNLLDEAIERTKQNIVKKQAMTY
EEMEEERKGEEGRAEIESDEEEEGAFHNPLNLPMGVDGKPIPYWLYKLHGLGQKFECEIC
RNKIYKGRRAFERHFKEPQHQDGMRCLGIPNTKNFNEITSIKEAKELWKRIQERQGVNKW
KPEVEEEYEDGDGNVYNKKTYSDLKRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcatcgacactcctcgatcaaattcgctgcaatcatgaggagatcgaaagattggag
cgattggttgttcaagatctacagacccagccgtcctcgagcaaggacagattggtacag
ggccaccgtgtccgcaacacgattcattctatcatgcgaaccatcgagaagctcgttgaa
acttatgaagataaggatggagctagggaagatgagattgctgcgcttggtggccggact
gcgtcaggggttaatgtgtactgtgcgttttatgatcgtttgaaagagatacgtgagtac
catagaaagtatcctcctggacctcttgttgatgccagcgcggactacgaagcacttctg
aaggcgaaaccagttatttccttcagtggagaggaaggagctggtcggtacttggacttg
catgatatgtataaccagtacatcaactctaaattcggggacagggttgaatattctgtt
tacctcgatgtcttttctcatccagagaaagtacctcgcagactgaagttttcaaggcaa
tacatgaagtacatggaagctctgctagagtacttggtcaactttctccaccgaactgag
ccgttgcaagaccttgacagaatgctttccaaggttgaggttgattttgaagagcaattt
gcagatggaaaagtgataggctgggagagccacggccaggaaagtaaacttgttccatct
gagcatactgtcatagatcttggttactacaccacagctgatgaattgactggtgtggga
cctgaaaagctgaaggaggcgctggggtctttgggacttaaagttggtggtacactgcag
cagcgtgccgagagacttttcctcacaaagcattcgcctctggaaaagctggataagaaa
cattttgccaaacctctgcacaaagggagacaaaatggagatgccaaagcaacgcaggag
ccagacagtgctaaacagattgcactaacagaggccaaagtgaagaagctctgcaactta
cttgatgaggcaatcgaaaggactaagcaaaacattgtaaagaagcaggccatgacgtat
gaagagatggaggaagaacgcaagggggaggaaggacgggcagagatagaaagtgatgaa
gaggaggaaggtgcctttcacaatccactgaacctgccaatgggtgtggacgggaagcct
ataccatactggctctacaagcttcatggccttggccagaaatttgaatgcgagatatgt
agaaacaaaatctacaaggggagaagggcttttgagagacattttaaagagcctcaacac
caagatggaatgcgttgcttggggatcccaaacacaaagaacttcaacgagatcacttct
attaaggaagcgaaagaactgtggaagaggatacaggagaggcaaggagttaacaaatgg
aagccagaggttgaagaagaatatgaagatggtgatggtaacgtttacaacaagaagact
tactctgatcttaaacgtcaaggtctcatctga

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