Brassica napus (rape): 106426996
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Entry
106426996 CDS
T04128
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
bna
Brassica napus (rape)
Pathway
bna00450
Selenocompound metabolism
bna00970
Aminoacyl-tRNA biosynthesis
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
106426996
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106426996
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106426996
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106426996
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
106426996
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106426996
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106426996
Prokaryotic type
Other AARSs
106426996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
106426996
NCBI-ProteinID:
XP_013723180
UniProt:
A0A078FEB2
LinkDB
All DBs
Position
C4:40140457..40146054
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AA seq
792 aa
AA seq
DB search
MEDGESCPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI
CGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQA
IFKKLFENNFLSENTMQQLYCDTCQKFLADRLVEGSCPFPECNYDSARGDQCEKCGKLLN
PTELKDPRCKVCQTTPRIRDTDHLFIELPLLKDRLEKYIDDTSVTGSWSQNAIQTTKAWL
KEGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENV
ELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYETGKFSKSKGVGVFGND
VKDTNIPVEVWRYYLLTNRPEVSDTLFTWGDLQAKLTGELLNNLGNFVNRVLSFIAKPEP
SGYGSVIPDAPGAESHPLTQSLAEKVGKFVKEYVEAMEKVKLKQGLKIAMTISNEGNAYL
QEAQFWKLFKEDKPSCAIVIRTAAGLVYLLAQLLEPFMPSFSREVFKQLNLSLQFSLSDE
GIASRLWEILPPGHRIGTPQPLFKELKDEEVQQYKDKFAGNQADRRARDVEAANMAEQLK
KTKLSDAKKQKASKGAGTSKPQPAATLEITMARLDIRVGKILKAEKHPNADSLYVEQIDV
GGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPSKMRDIMSQAMVLAASSSDGSKVELV
EPPESATIGERVRFAGHEGEPDVVLNPKKKVWETLLVDLNTNENLVACYKDIPFTTDAGV
CKVSSISNGTIR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggagaaagctgccctaagcttccgattcctgggaagagaaacatactaatc
accagtgccttgccttacgtcaacaacgtccctcatctcggaaacatcattggatgtgtt
ctgagtgctgatgtgtacgcaagatactgccgtctccgtggctataatgcgatatatatc
tgtggaaccgatgaatacggaactgcaactgagaccaaagctcttgaggagaattgcacc
cccaaggaaatctgtgacaagtaccatgccattcataaagaagtttatgactggtttgat
ataagttttgacaagtttgggcgaacttcaactccagaacagactgaagtatgccaagca
attttcaaaaaattgtttgaaaacaacttcctttcagagaacaccatgcagcagctttac
tgcgatacatgccagaagttcttagctgaccggcttgttgagggctcttgtccgtttcca
gaatgtaattatgattctgctcgtggtgatcagtgcgaaaaatgtggaaagctcctgaat
cctactgaactcaaagatccgaggtgcaaggtctgtcaaaccacaccccgaattcgcgac
acagaccacctgtttattgagcttccattgctgaaagataggttggaaaagtatattgac
gatacatctgttactggatcttggagtcaaaacgctattcaaacgacgaaagcatggctt
aaggaagggctaaggcagagatgtattacaagggatctaaagtggggagttcctgttcca
catgagaaatataaggaaaaagtcttttacgtctggtttgatgctcctattggatacgtc
tcaataacgtcatgctacacatctgaatgggagaagtggtggaagaatcctgagaatgtg
gagctttatcagtttatggggaaagacaatgtgccatttcatactgtgatgtttccatct
acgcagcttggaactggggaaaattggacactgatgaagacaatcagtgtgactgagtat
ttaaattacgaaaccggaaagttctccaagagtaaaggtgttggagtgtttggtaatgat
gtaaaagatacaaatatccctgtcgaagtatggagatactacttgctgaccaacaggcct
gaggtgtctgacacattatttacatggggagatttgcaagcgaaactgactggcgagttg
ctgaacaacctaggaaacttcgttaatcgagttctgagttttatagcaaagcctgagccc
tcaggttatgggtctgtcattcctgatgctcctggtgctgaatctcatcctctaacgcaa
tccctggctgaaaaggttggaaagtttgtaaaggagtatgttgaagctatggaaaaggtt
aagctcaagcagggactgaaaattgctatgaccatctcgaatgaagggaacgcatacttg
caggaagcccaattttggaaacttttcaaggaagataaaccttcttgtgcaattgtcata
agaactgctgctggtttagtataccttcttgcacagttgttagaacctttcatgccgtcc
ttttctcgggaggtatttaaacagctaaatttgtctctacaattttcactctccgacgag
ggaatagcaagtagactttgggagatactgcctcccggtcacaggataggcacccctcaa
ccattgttcaaggaattgaaagatgaagaagtgcaacagtacaaagacaagtttgctgga
aatcaagctgatagacgtgctagggatgtagaagcagcaaatatggcggagcagcttaag
aaaacaaaactttcagatgctaaaaagcaaaaggcgtcaaaaggagcgggaacatccaaa
cctcagccggctgctactcttgaaattacaatggcaagacttgatattcgagtcggtaaa
attctaaaggctgagaagcatcctaacgcagattcattgtatgtggaacaaattgatgtt
ggaggaggtgaaattcgcaccgttgttagtggactggtcaaatatattcctcttgaggag
atgcagaaccgtatggtgtgtgtgctttgcaacttgaagccctcgaaaatgagggatatt
atgtcacaggcaatggttcttgccgcttccagtagtgacggcagcaaggtggagttagtt
gagccccctgaatctgctacgattggtgaacgagttagatttgctgggcatgaaggtgag
ccagacgttgtgttaaacccaaagaagaaagtatgggagacacttttggtggatcttaac
acgaacgagaacctagttgcttgctataaagatataccctttactacagatgcaggtgtc
tgcaaggtttcatccatcagtaatggcactatccgttaa
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