Brassica napus (rape): 106427161
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Entry
106427161 CDS
T04128
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106427161
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106427161
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106427161
03036 Chromosome and associated proteins [BR:
bna03036
]
106427161
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106427161
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106427161
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106427161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
DUF4213
Motif
Other DBs
NCBI-GeneID:
106427161
NCBI-ProteinID:
XP_013723349
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Position
C5:9951552..9956177
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AA seq
502 aa
AA seq
DB search
MNGGDDAASSAAASGPPPSLEWRFSQVFGERTAGEEVHEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDTKDNGGSRRDAEQMDYTVRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQPANGALFLLSTNDKTIKYWKVQEKKIKKISEMNIDPSKDPGSSSPLPLIANGVH
ADKPQDYLSKDFPFPPGGIPSLRLPLVVTSQETNLVARCRRVYAHAHDYHINSISNSSDG
ETFISADDLRVNLWNLEVSNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKG
SIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKNGRYILSRDYMTLK
LWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGSRVATGSYSNLFRVF
GASQGSTEAATLEASKNPMRRQTPARSSRSMTSVVRRGSESPGSDANGNAHDFTTKLLHM
AWHPTENSIACAAANSLYMYYG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgacgatgctgcttcctccgccgctgctagtggtcctcctccgtctcta
gagtggagattctctcaggtcttcggcgagcgaaccgccggagaagaagtccatgaagtt
gacatcatttcagccattgagtttgataaaagtggagaccatctcgcaactggtgaccgt
gggggccgagtagttctttttgagaggacggatactaaagataatggtggatccaggagg
gatgctgagcagatggattacacagttaggcatcctgagtttcgatacaaaacagagttt
cagagtcatgaacctgagtttgactatctcaagagtttggaaatagaggagaaaatcaac
aaaatcagatggtgtcagccagcaaatggtgcattgtttctgctttccacaaatgataaa
accatcaaatattggaaggtacaagagaagaagatcaagaaaatttctgaaatgaatatt
gatccgtccaaagatccaggttcaagtagccctcttccattaattgctaatggagtacat
gccgataaaccacaagactacctgagcaaggactttcccttcccgccaggaggcattcca
tctctgcgtttgcctttggtagtgactagccaggagacaaaccttgtggctagatgccga
agagtgtatgcgcatgctcacgattaccatattaattcaatctcaaatagcagcgatgga
gaaacctttatttcggctgatgatctgcgagtcaatctctggaatttggaagtcagcaac
cagagtttcaatattgttgatgttaagcccacaaacatggaggacttaactgaggttatt
acatcagctgagttccacccaatccattgtaatatgctcgcatatagcagttcaaaaggc
tccatccgtttgattgatatgaggcaatcagctctgtgcgattctcatactaaattgttt
gaagaaccggaagcacctggttcaagatcatttttcacagagataattgcctcaatttca
gatattaaattctcaaagaatgggagatacatacttagtcgcgattacatgaccctcaag
ctgtgggacataaacatggattctggtccagttgcgtcttaccaggttcatgaacatctg
agaccaaggctatgtgatctctatgaaaatgactccatctttgataaattcgagtgttgt
ctgagtggtgatggatcgagggtagcaacaggctcttacagcaatctgttccgcgtattt
ggagcgtctcaaggaagtactgaagctgcaacgttggaagctagcaaaaacccgatgagg
aggcaaacacctgcgagatcttccagatctatgacaagcgtggttagacgaggatcagag
agtccaggatcagatgcgaacggaaacgcacacgatttcacaactaagttgctgcatatg
gcttggcacccaacggagaactcaattgcttgtgcagcagccaacagcttgtacatgtat
tatggatga
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