KEGG   Brassica napus (rape): 106427709
Entry
106427709         CDS       T04128                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106427709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106427709
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106427709
 Complex B
    106427709
 Complex C
   U2 SnRNP specific factors
    106427709
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd zf-C2H2_jaz
Other DBs
NCBI-GeneID: 106427709
NCBI-ProteinID: XP_048624567
LinkDB
Position
A3:complement(1048285..1051574)
AA seq 512 aa
MSSTLLDQIRCNHEEIERLERLVVQDLQTHPSSSKDRLVQGHRVRNTIHSIMRTIEKLVE
TYEDKDGARDDEIAALGGHTATGINVYSAFYDRLKEIREYHRKYPSGPLADATADYEALL
QVKPVISFSGEEGVGRYLDLHDMYNQYINSKFGDRVEYSAYLDVFSHPEKIPCKLKLSRQ
YMKYMEALLEYLVNFFQRTEPLQDLDKMLSKVETDFEEQFADGKVIGWESHGQESKLVPS
EHTVIDFGYYTTVDELIGVGPEKLKEALGALGLKVGGTLQQRAERLFLIKNTPLEKLDKK
HFAKPALKGNQNGDAKAMQGADSSAKQIALTEAKVKKLCNLLDETIERTKQNVVKKQAMT
YEEMEEERKGEEERAEIESDEEMEEGAFHNPLNLPMGVDGKPIPYWLYKLHGLGQKFKCE
ICRNKIYKGRRAFERHFKESQHQDGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVN
KWRPEVEEEYEDGDGNVYNKKTYSDLLRQGLI
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtcatcgactctcctcgatcaaattcgctgcaatcacgaagagatcgaaagattggag
cgattggttgtgcaagatctacagactcatccgtcctcgagcaaggacagattagtacaa
ggccaccgcgtccgcaacacgattcattctatcatgcgtaccatcgagaagctcgttgaa
acatatgaagataaggatggagctagggatgatgagattgctgcgcttggtggccacact
gccacagggattaatgtgtacagtgcgttttatgatcgtttgaaagagatacgtgagtat
catagaaagtatccttctggacctcttgctgatgccactgcggactatgaagcacttctg
caggtgaaaccagttatttctttcagtggagaggaaggagttggtcggtacttggacttg
catgatatgtataaccagtacatcaattctaaattcggggacagggtcgaatattctgct
taccttgatgtcttttctcatccagagaagataccgtgcaaactgaagctttcaaggcaa
tacatgaagtacatggaagctctgctagagtacttggtcaactttttccagcgaacggag
cccttgcaagaccttgacaaaatgctttccaaggttgagactgattttgaagagcaattt
gcagatggaaaagtgataggctgggagagccacggccaggaaagtaaacttgttccatct
gagcatactgtcattgattttggttactacactacagttgatgaattgattggtgtggga
cctgaaaagctgaaggaggcgctgggagctttgggacttaaagttggtggtactctgcag
cagcgtgccgagagacttttcctgataaagaatacgcctctggaaaagctggataagaaa
cattttgccaaacctgcgctcaaagggaatcaaaacggagatgccaaagcgatgcagggg
gccgacagtagtgctaaacagattgcactaacagaggccaaagtgaagaagctctgcaac
ttacttgatgagacaatcgaaaggacaaagcaaaacgttgtaaagaagcaggccatgacg
tatgaagagatggaggaagaacgcaagggggaggaagagcgggcagagatagaaagtgat
gaagagatggaggaaggtgcgtttcacaatccactgaacctgccaatgggtgtggacggg
aaacctataccgtactggctctacaagcttcacggccttggccagaaatttaaatgcgag
atatgtagaaacaaaatctacaaggggagaagggcttttgagagacattttaaagagtct
caacaccaagatggaatgcgttgcttgggaatcccaaacacaaagaacttcaacgagatc
acttctattgaggaagcgaaagaactgtggaagaggatccaggagaggcaaggagttaac
aaatggaggccagaggttgaagaagaatatgaagatggtgatggtaacgtttacaacaag
aagacttactctgatcttctacgtcaaggtctcatctaa

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