Brassica napus (rape): 106429454
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Entry
106429454 CDS
T04128
Name
(RefSeq) synaptotagmin-1
KO
K28063
extended synaptotagmin
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106429454
Membrane trafficking [BR:
bna04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
106429454
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
PTEN_C2
UQCC3
Motif
Other DBs
NCBI-GeneID:
106429454
NCBI-ProteinID:
XP_013725653
UniProt:
A0ABQ8C8J5
A0A078FL33
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Position
A9:complement(40018378..40021294)
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AA seq
541 aa
AA seq
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MGFFSTILGLCGFGIGISMGLVIGYFLFVYLQPNDVKDPQIQSIADQDPKSMLRMLPEIP
LWVKNPDFDRVDWINKFLEYMWPYLDKAICKTARNIAKPIIEEQIPKYKIDSVDFETLTL
GSLPPTFQGMKVYLTDEKELIMEPCLKWAANPNVLVAIKAFGLKATVQVLDLQVFAQPRI
TLKPLVPSFPCFASIYVSLMEKPHVDFGLKLGGADLMSIPGLYRFVQEQIKDQVANMYLW
PKTLVVPILDPAKAFRRPVGIVHVKVVRAVGLRKKDMMGGADPYVKIKLSEDKIPSKKTT
VKHKNLNPEWNEEHKFSVRDPQTQVLEFSVYDWEQVGKHDKMGMNVLPLKEMVPNEHKSF
TLELRKTMEGAEEGVQPDKDRGKLEVELLYKPFTEEEMPKGFEESQSVQKAPEGTPAGGG
VLAVIVHSAEDVEGKHHTNPYVRIYFKGEERKTKHVKKNRDPRWEEEFTFMLEEPPVREK
LHVEVLSTSSRIGLLHPKETLGYVDIPVVDVVNNKRMNQKFHLIDSKNGKIQIELEWRTT
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggggttcttcagcacaattctagggttatgcggatttgggatagggatatcgatggga
ctcgtcatcggatacttcctcttcgtctacctccagcccaacgacgtcaaggatcctcaa
atccaatcgatagcagaccaagaccccaaatccatgctccgtatgcttcccgagatcccc
ctctgggtcaagaaccccgacttcgaccgcgttgactggattaacaaattcctcgagtac
atgtggccttacctcgacaaggccatctgcaagaccgccaggaacattgccaagcccatc
atcgaggagcagattcccaagtacaagatcgactctgttgatttcgagactctcactctc
ggctccttgcctcctactttccaagggatgaaggtttacctcaccgacgagaaggagctg
attatggagccttgcttgaaatgggctgctaatcctaacgtcttggtcgctatcaaagct
ttcggcctcaaggctaccgttcaggtccttgatctgcaggtttttgcacagcctcgtatc
actctcaagccattggttccgagctttccttgttttgccagtatctatgtctctcttatg
gaaaagccacatgttgattttgggctgaagcttggtggagctgatcttatgtctatccct
ggcctctacagatttgtccaggagcaaatcaaggatcaagttgcgaacatgtatctctgg
cctaagacccttgtagttccgatccttgaccctgccaaagcgtttagaaggccggttgga
atcgtccatgtgaaggtcgtgagggctgttgggctgaggaagaaagatatgatgggtggg
gcagacccatacgtgaagatcaagctctctgaagacaagattccgtctaagaagaccact
gtcaaacacaagaatttgaaccctgaatggaacgaggaacacaaattctcagtcagagat
ccccagactcaggtcctcgagttcagtgtgtatgactgggaacaggttggaaagcacgat
aagatgggtatgaatgtattaccgctgaaagaaatggtgcctaacgaacacaaaagcttc
actttggaactgcgcaagactatggagggggctgaagaaggagtgcagcctgacaaggat
agggggaagctggaggttgagctcttgtataagccattcacagaggaagaaatgccaaag
ggcttcgaagaatcgcaatcagtgcagaaggctccagaaggcacaccggctggtggagga
gtgcttgcggtgatagtgcattcggctgaagacgttgaaggcaagcaccataccaaccct
tacgtgcgtatctatttcaaaggagaggagaggaaaaccaagcacgtgaagaagaacaga
gacccgaggtgggaggaggagttcaccttcatgctcgaggagcctccggtgcgcgagaag
ctccacgtggaagtactgagcacctcttcaaggataggtctcttgcatcccaaggaaaca
ctggggtacgtggacattccggtggtggacgtggtgaacaacaaaaggatgaaccaaaag
tttcaccttatcgattccaagaacggaaagatccaaatcgagcttgagtggcgaaccacc
tcttag
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