Brassica napus (rape): 106439244
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Entry
106439244 CDS
T04128
Name
(RefSeq) pumilio homolog 4 isoform X2
KO
K17943
pumilio RNA-binding family
Organism
bna
Brassica napus (rape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
pEK499_p136
DUF3574
Motif
Other DBs
NCBI-GeneID:
106439244
NCBI-ProteinID:
XP_013736104
UniProt:
A0A816VNW1
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Position
A3:complement(16554596..16559432)
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AA seq
990 aa
AA seq
DB search
MYTDSYTDTRSNMNRGSNAADLEDRFQRELESLLQQHRNHQTFGSQRGDRDVVADVHRSG
SAPPTVEGLLRAMDNQYLMNTNADYIRDAANVGVELLSDDELRWHPAYLSYYYSNEHSNP
RLPPPLLSREDWRVAQRFHNGETVFDPVGEWRKKGENSNSNSNNNSSSSLFSVQPGVEQA
ESDLMELRNAVAQGRSQKTAVQRLDPGLGPRRKSFADILQEGLDRDAALRSQLSRPASCN
TFRDMNDPAVLTNFSPGGFDSPLAFHESLHSAGQNTPNAMLGSNMSSPVPRNRTPESHLV
GRASASGLPPIGTRVGPVEKKNTFGSAIHTAADVADTLSRLNMAEMNQVKDNLMQSQIQV
ELENQSDVMRYIPNGHKKALRQQGIGMTESNDQLFSSNYGGVMSGYGTSLGASTVASHGQ
VNIPKRASSSASLYSTSDRSRLGSLGLSDNIQNANVNGMDFSTAGGYLVNNKLNSLAEHY
SPEGSHLNGEGDIQNLNRLINQAAAELHSPIMDPHYSQYRHTASATGAPSDHPLLRNNLG
TSNGDTANEYLAMLLAQQRHQLGNLSAANSRLFDNPPYDLGSMYLGNHLPSPSKNSRNLQ
NMRMSQSAASMMKIPLGGLPGSSHVDIGSATEASLLEGFKNNKTRSLELSEIVGHVIEFS
MDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTNKQRKEL
AEQVTGHVLALSLQMYGCRVIQKALEVVDVEQQAQMVRELDGSVLKCVHDQNGNHVIQKC
IERLPQECIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMNSVCTL
AQDQYGNYVIQHIIQHGKPHERTEIINKLAGQIVTMSQQKFASNVVEKCLTFGGPEERQV
LVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLSLIISRIKVHLNALKRYTYG
KHIVARVEKLITTGERRIGLSSSLAANASP
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtatactgatagctacacggacacgcgatcaaacatgaaccgaggatccaatgccgcc
gatctcgaggatcgattccagagagagctcgaatctctcctgcaacagcatcgcaaccac
caaacattcggctcgcaacgaggagaccgagacgtcgtcgccgatgtgcacagaagcgga
agcgcgccgccgacggtggaaggtttgttgagagccatggataatcaatacttaatgaac
accaacgctgattacatcagagacgctgcgaacgtcggcgtcgagcttttatccgacgac
gagttgcgttggcaccctgcgtatttatcgtactactactcgaacgagcactcgaacccg
aggctgccgcctccgttgctgtctagggaggattggagagttgctcagaggtttcataat
ggtgagacggtgtttgatcctgttggggagtggaggaagaaaggtgagaacagcaacagc
aacagcaacaacaactcctcgtcgtcgctattctctgttcagcctggtgttgagcaggcg
gagagtgatttgatggagctgaggaatgctgtagcgcagggacgctctcagaagacggct
gtgcagaggctagatcctgggcttgggcccagaaggaagagtttcgctgatatacttcag
gaaggacttgacagagatgcagccttacgcagccagctttctcggcctgcgagttgcaac
actttccgcgacatgaacgatcctgctgtcttaacgaattttagtccgggtggattcgac
agcccattagcattccatgagtctttacattccgctggacagaacactccaaatgctatg
ctgggatctaacatgagttctccggtgccaaggaatagaactcctgagtcacatctagta
gggcgagcgtcggcctctggtttgccccctattggaacaagagtcggtcctgtcgagaag
aagaatacgtttggctcagccatccacactgctgctgatgttgctgacacgctgtcgagg
ttgaacatggcagagatgaatcaagtcaaagataaccttatgcagtcccagattcaggtg
gaattggagaatcaatctgatgtcatgcgttacatacccaatggtcataagaaggctctg
cgtcaacagggtattggtatgacagagtcaaacgatcagttattttcttcaaattatggt
ggagttatgagtggttatggaacaagccttggtgcttctacggtggcttcccacggacag
gtcaacatccctaaacgagcctcctcttcggcgagtctatactcaacttcagaccgctct
agattaggaagcctgggcttatctgataatattcagaatgcaaatgttaatggaatggac
ttctccacagctggtggttatttggtaaataacaagttgaattcactagctgagcactat
tcccctgaaggctcacatttgaatggggaaggggatatacaaaacttgaatagattgata
aaccaagctgctgctgagcttcattctccaattatggaccctcattacagccagtatcgg
catacggcatcagctactggtgcaccaagtgatcatcctcttcttagaaacaatctcggg
acatcaaatggagatacagctaatgagtatctcgcgatgttacttgctcagcagaggcat
cagctgggtaatctcagtgctgcaaattccagattgtttgataatcctccatatgatctt
ggcagcatgtatctgggaaaccatttaccttctccttccaagaattcaagaaacctccag
aacatgcgaatgtcacaatctgctgcctcaatgatgaaaatcccccttggaggattaccg
ggatcttcccatgtagatatcggcagcgcaacggaagcatcattactagaagggttcaag
aacaacaagacaaggtctttggagctttcagaaatagttgggcatgtgattgagttcagc
atggatcaatacggaagtcgtttcattcagcaaaaacttgagactgcaacagatgaggaa
aagaatgcaatattccctgaaatacttccttatggtcgcactttaatgacagatgtcttt
ggaaattatgtcattcaaaagttttttgagcatggtacaaacaaacagagaaaagaactc
gctgaacaagttactggccacgttttggctctctctctacaaatgtatggctgcagggtt
atccaaaaggcgttggaggtggttgatgttgagcagcaagctcaaatggtgcgagagctt
gatgggtctgtcttgaaatgcgttcatgatcagaatggtaatcatgtgatccagaagtgt
attgagcgtcttcctcaggaatgcatacagttcattatttcctcattttatgggaaagtc
ttagctctttcaacacacccttatggatgccgtgttatccagagggtactggagcatatt
gatgacatagaaacccaacggatcattatggaggaaatcatgaactcagtctgcactcta
gctcaagatcagtacgggaactatgttattcagcatatcatacaacacggtaaaccacac
gaacggacagaaattatcaataagcttgctgggcagattgtgacgatgagtcaacagaaa
tttgcttctaacgttgttgaaaagtgcttaacgtttggcggtccagaggaacgccaggtt
ctagtgaatgagatgcttggctatactgatgaaaacgagcctcttcaggcgatgatgaag
gatccattcgggaactacgtagtgcagaaggttcttgaaacatgcgatgatcaaagcctt
tcactcattatttctcgcatcaaagtccacttgaatgccttgaagcgatacacatatggg
aaacacatcgttgcccgcgttgagaaacttatcaccactggagagagaagaatcgggctc
tcgtcatctctagctgcaaatgcttctccttag
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