Brassica napus (rape): 106439695
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Entry
106439695 CDS
T04128
Name
(RefSeq) protein SPA1-RELATED 2
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
bna
Brassica napus (rape)
Pathway
bna04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
106439695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106439695
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Multi subunit type E3 associated proteins
106439695
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
Pkinase
ANAPC4_WD40
WD40_like
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
106439695
NCBI-ProteinID:
XP_013736653
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Position
C9:complement(29575766..29580897)
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AA seq
995 aa
AA seq
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MMDESSVSSSINEAEAAHIQFKNGQQSLKPDEIQETKQVQAEVQRDDPGSPDSSFGVIAD
FLDGKNVNETENEPCSADDVVEELTVKTCEGSSMAIVGSSSSGARLEINRTQFLPSSSSM
DKREGDKVITSILRNAGKTSTGDVERNPVPVDALSHGGIKTKMLSQSGFSQFFVKKTLKG
KGVTFRGPPLNRSKASNVDQQSVASPSVISNDTPAKVSGSTPLAVEACDVLPLKGGNPSS
CTSNPSDSGCGGEGLSLRDWLKSERQEVNKAECFRIFRQIVEHVDDSHSQGVVLSDPRPS
FFKILKENEVKYVGSGFHRESSDSNLNKNTLSQPEKPLVRRRLGDTGFASSPGVPAKKHK
SSGPSSRQWPMFQRAGGNLNIQTENDVSATQELRLRSSHPQCSPSARSFTSMSEQLEEKW
YASPEELRGETRSVSSNIYSLGILLFELLSQFQSERAREAVMSDIRHRILPPKFLSENPK
EAGFCLWLLHPEPSCRPSTRDILQSEVVNGIPDLYAEGLSLAIEQEDTESELLQHFLVLS
QEQMQKHAGKLMGEIVSLEADIEEIVKRRCAISPLSVGEASGSSLASSVPEKRLVTNIKQ
LETAYFGARIDVHLPEARYRLRPDRDLLRNRDENVISEQENSETWSSDDRVGAFFDGLCK
YARYSKFETRGVLRTGELNNTSNVICSLGFDRDEDYFATAGVSKKIKIFEFNSLFNESVD
IHYPAVEMSNRSKLSGVCWNNYIRNYLASSDYDGIIKLWDVTTGQAISHFIEHEKRAWSV
DFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFR
TYCYDTRNLRTPWCILSGHNKAVSYAKFLDSETLVTASTDNTLKLWDLKKTTHGGLSTNA
CSLTFGGHTNEKNFVGLSTADGYIACGSETNEVYAYHRSLPMPITAYKFGSIDPISGKEI
EEDNNLFVSSVCWRKRSNMVVSASSNGSIKVLQLV
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaaagctcagtgagtagcagcatcaatgaagccgaagctgctcacatccaa
ttcaaaaacggtcagcaatctcttaaaccggatgaaatccaggaaaccaaacaagttcaa
gctgaggttcagagggatgatcccggttctcctgatagctcctttggcgtgatagctgat
tttctagacggtaagaatgtcaatgagacagagaatgaaccatgttctgctgatgacgtg
gttgaggagttgactgttaaaacttgtgaaggatcgagcatggccatagttggtagttca
agtagtggagctaggttagagatcaatcgcactcagtttctgcctagtagcagttctatg
gataagagggaaggtgacaaagtaataacaagtatcttgagaaatgcaggcaagacctca
actggtgatgttgaacgaaaccctgtaccggtagatgcattgtcccatggaggcatcaag
acgaagatgttgtcgcagtctggtttctctcagttttttgttaagaaaaccttgaaggga
aagggtgtcactttcagaggaccgccgcttaatagatctaaagctagtaatgtggatcaa
cagtctgtggctagcccttcagtaatatctaacgatactccagcgaaggtttcgggcagc
actcctttggcggtggaggcttgtgacgttttgcctttaaaaggcggtaatccatcttct
tgtacttctaatccttcggatagtggttgtggaggtgaaggtttaagtctgagagattgg
ttgaagtcagagcgtcaggaagttaataaagctgaatgttttcgtatctttaggcagatc
gtggagcatgtggatgattctcattcccaaggagttgttttatctgacccacggccatct
ttctttaaaattctcaaggagaacgaggtcaagtatgttggttcaggttttcaccgggag
tcttctgacagcaacttgaacaaaaatacattaagtcaacccgagaaacctctggttaga
aggaggttaggagatacaggatttgcttctagtcccggcgtccctgcaaagaagcacaag
tcaagtggaccaagctctagacagtggcctatgtttcaacgagccggcggcaacctcaat
atccaaactgaaaatgatgtcagcgcaacacaggagcttcgtctaagatcgagtcatcct
cagtgtagtccatctgcccgttcttttacgtcaatgagtgagcagttggaggagaaatgg
tatgcaagtcccgaggagctcaggggcgagactcgttcagtctcttcaaacatttatagt
ttgggtatccttcttttcgagctgcttagtcaatttcaaagtgaaagagctcgtgaggct
gtaatgtctgatatccgtcaccggattctcccgcccaaatttctgtcagagaatccaaag
gaagctgggttctgtctctggttacttcatccagagccttcatgccgaccatcaaccagg
gatatcttgcagtctgaagtggttaatggaattccagatttatatgctgaaggtttgtct
ttagctattgaacaagaggacacagagtctgaactgttacagcatttcctcgttttgtcc
caagagcaaatgcagaagcatgctggaaagttgatgggagaaattgtgtccttagaagca
gatattgaagaaattgtgaagaggcgttgtgccataagtcctctgtctgtgggagaagct
tctggctcatcgcttgcttcaagtgtacctgaaaagagactggtcacgaacattaaacag
cttgaaactgcttatttcggagcaaggatagatgttcatcttcctgaagcacgttatagg
ttacgcccggatagagatctgctaagaaatcgtgatgagaatgttatatcagaacaagaa
aatagtgagacgtggagctcagatgatcgcgttggagcgttctttgatggattatgcaag
tatgctcgatatagcaagtttgaaacacgaggtgttctgaggacaggggagttgaacaac
acttcaaatgtgatttgttctctgggttttgatcgagacgaagattattttgctacggct
ggtgtttcaaagaaaatcaagatattcgagttcaattccctattcaacgaatctgtggac
attcactatccagccgtggaaatgtcaaatagatcaaagcttagcggcgtttgctggaac
aactatatcaggaactacttagcttcctctgattatgatggtatcatcaagctatgggat
gtgacaacaggacaggccatttcacatttcatagagcacgagaagcgggcctggtctgtt
gatttctctgaagcgtgtccgacaaaattagccagtggaagcgatgattgttctgtgaag
ctgtggaacatcaacgagaggaactgcttaggaacgatcaggaacattgcaaacgtttgt
tgtgtgcaattttctccacagtcctctcatctgctagcctttggatcatcagatttcaga
acatactgctacgatacacggaatttaagaactccttggtgcatactgtcaggacacaac
aaagcagttagctacgccaaattcttggatagtgaaacccttgtcacagcatcaactgat
aacacgttaaagctttgggatcttaagaaaaccactcacggtggcctctccacaaatgct
tgcagcttaacttttggtggccatacaaacgagaagaactttgttggtttgtctactgcc
gatggatatatagcttgtggctctgagacaaatgaggtttatgcatatcaccggtctctt
ccaatgcccattaccgcgtacaagtttggttcgattgatcctatatcaggaaaggagatt
gaggaagacaacaacctatttgtttcaagcgtttgctggagaaaaaggtcaaatatggtt
gtttcagctagctcaaatgggtctatcaaagttctacagctggtttga
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