Brassica napus (rape): 106443353
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Entry
106443353 CDS
T04128
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106443353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106443353
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106443353
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
CDC45
Pox_Ag35
FAM176
Tim54
Fibin
CPSF100_C
Cut8
RR_TM4-6
MCM3_WHD
Motif
Other DBs
NCBI-GeneID:
106443353
NCBI-ProteinID:
XP_013740371
UniProt:
A0A078HMZ4
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Position
C3:8282249..8292812
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AA seq
353 aa
AA seq
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MSDFLEECEFVDTSLAEDDLFAILEGLEGAGEISPTAASTPKDGATNSKELVTDPNYETS
SPKKKRKRLETEKEDEEEEDGEEEEEEEENKQQKMSHVTVERNRRKQMNEHLTVLRSLMP
CFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVPSPRPSPPVLSP
RKPPLSPRISHHHLLLPPISPRTPQPTSPYLAHAPQLPLIPQPPLRSYSSLAGGSSLGDP
PPYSPASSSSSPSVSSIRESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVL
KIIAALEDLALEILQVNINTVNETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttcttgaagagtgtgaatttgtcgacacttcactagccgaagatgatcta
tttgccatcttagagggtcttgaaggcgccggagagatatctccaacggctgcatctaca
cctaaagatggagccacaaattccaaagagttagtaactgatccaaactacgaaacttca
tctcctaaaaagaagaggaaaagactagaaaccgagaaagaagatgaagaagaagaagac
ggagaagaagaagaagaagaagaagagaataagcaacaaaagatgtctcacgtaaccgtg
gaacgcaacaggagaaagcaaatgaacgagcacttaaccgttttacgttctcttatgcct
tgtttctacgtcaaaaggggggaccaagcatcgataataggaggagttgtggaatacatt
agcgagctacaacaagttcttcaatctttagaagccaagaaacaacgtaagacgtacgca
gaagtccttagcccgagactagtcccgagtcctcgtccttcacctcctgtcctaagcccg
cgaaaaccacctcttagcccgcgtatcagccaccatcatctccttctgcctcctataagc
cctcgaacccctcagcctacaagcccatacctggcccatgccccgcaactaccactcatc
ccacagcctcctcttcgttcttatagctcattggccggtggtagcagcttaggggaccca
cctccatactctccagcttcatcttcttcctctccttcagttagtagtatccgtgagagt
agtgtgataaatgagctcgtcgctaactctaagtcggctttggctgacgtggaagtgaag
ttctcaggagctaatgtgctgctcaaaacggtgtcgcataagatccctggacaggttttg
aagataatcgctgctcttgaggatttggctctcgagattcttcaggttaatattaacacc
gtcaacgaaaccatgcttaattctttcaccatcaagattggaattgagtgccagctaagt
gccgaagaactggctcaacaaattcagcaaacattctgctag
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