Brassica napus (rape): 106443382
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Entry
106443382 CDS
T04128
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106443382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106443382
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106443382
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
RPT
Fibin
FAM176
Cut8
Motif
Other DBs
NCBI-GeneID:
106443382
NCBI-ProteinID:
XP_048629781
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Position
A3:6390837..6396119
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AA seq
349 aa
AA seq
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MSDFLEECEFVDTSLAEDDLFAILESLEGAGEISPTAASTPKDGATSSKELVTDPNYETP
SPKKKRKRLETEKEDEEEEDGEEEENKQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYV
KRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVPSPRPSPPVLSPRKPP
LSPRISHHHLLLSPISPRTPQPTSPYLAHAPQLPLIPQPPLRSYSSLAGGSSLGDPPPYS
PASSSSSPSVSSIRESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVLKIIA
ALEDLALEILQVNINTADETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttcttgaagagtgtgaatttgtcgacacttcactagccgaagatgatcta
tttgccatcttagagagtcttgaaggcgccggagagatatctccaacggctgcatctaca
cctaaagatggagccacaagttccaaagagttagtaactgatccaaactatgaaactcca
tctcctaagaagaagaggaaaagactagaaaccgagaaagaagatgaagaagaagaagac
ggagaagaagaagagaataagcaacaaaagatgtctcacgtaaccgtggaacgcaacagg
agaaagcaaatgaatgagcacttaaccgttttacgttctcttatgccttgtttctacgtc
aaaaggggggaccaagcatcgataattggaggagttgtggaatacattagcgagctacaa
caagttcttcaatctttagaagccaagaaacaacgtaagacatacgcagaagtccttagc
ccgagactagtcccgagtcctcgcccttcaccacctgtcctaagcccgcgaaaaccacct
cttagcccgcgtatcagccaccatcatctccttctttctcctataagccctcgaacccct
cagcctacaagcccatacctggcccatgctccgcaactacccctcatcccacagcctcct
cttcgttcttatagctcattggctggtggtagcagcttaggggacccacctccatactct
ccagcttcatcttcttcctctccttcagttagtagtatccgtgagagtagtgtgataaat
gagctcgtcgctaactctaagtcggctttggctgacgtggaagtgaagttctcaggagct
aatgtgctgctcaaaacggtgtcgcataagatccctggacaggttttgaagataatcgct
gctcttgaggatttggctctcgagattcttcaggttaatattaacaccgccgacgaaacc
atgcttaattctttcaccatcaagattggaattgagtgccaactaagtgccgaagaactg
gctcaacaaattcagcaaacattctgctag
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