Brassica napus (rape): 106446317
Help
Entry
106446317 CDS
T04128
Name
(RefSeq) crooked neck-like protein 1 isoform X1
KO
K12869
crooked neck
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106446317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106446317
03036 Chromosome and associated proteins [BR:
bna03036
]
106446317
Spliceosome [BR:
bna03041
]
Complex B
Other components
Prp19-related factors
106446317
Complex C
106446317
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106446317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_CcmH_CycH
TPR_2
TPR_17
HAT_Syf1_M
ARM_TT21
Trnau1ap
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
106446317
NCBI-ProteinID:
XP_013743468
LinkDB
All DBs
Position
A4:11136220..11147434
Genome browser
AA seq
706 aa
AA seq
DB search
MASGKDSDRTLGYMTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPK
QKITDSTELSDYRLRRRKEFEDKIRRARWNIQVWMKYAQWEESQKDYARARSVWERAIEG
DYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQ
IFERWMQWSPDQQGWLSFIKFELRYNEIERARSIYERFVLCHPKVSAYIRFAKFEMKGGE
VARARHVYERATEKLADDEEAETLFVAFAEFEERCKEPERARFIYKFALDHIPKGRAEDL
YKKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYVRLEETVGNKDRIR
EIYERAIANIPPAEEKRYWQRYIYLWINYALYEEIETEDVERTRDVYRECLKLIPHSKFS
FAKIWLLAAQFEIRQLNLAGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYER
YLEWSPENCYAWSKYAELERSLAETERARAIFELAISQPALDMPELLWKAYIDFEIAEGE
LERTRALYERLLDRTKHYKVWVSFAKFEASSAEQEEDEEEEPQEEIDATERKKECIRRAR
EIFERANSYYKDSAPELKEERATLLEDWLNMETNFGNLGDVSVVQSKLPKKLKKRKPITR
EDGSTEYEEYIDYLYPEESQTTNLKILEAAYKWKKQKLASSEEDYD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcaaagattccgatcgtaccctagggtacatgacccggaaagacaccgaa
gtcaagctcccacgcccgacccgggtcaagaacaagactcccgccccggttcaaatcacc
gcggagcagatcctaagggaagctcgagagcgtcaagaggccgagatccgccctcccaag
cagaaaatcaccgactccaccgagctctccgactaccgcctccgccgccgcaaggagttc
gaggacaagatccgccgcgcgagatggaacatccaggtctggatgaagtacgcccagtgg
gaggagtcccagaaggactacgcccgcgctcggagcgtgtgggaacgcgccatcgagggc
gattaccggaaccacacgctgtggctcaagtacgccgagttcgagatgaagaacaagttc
gtcaacagcgcgagaaacgtctgggaccgggccgtcacgctcctcccgcgcgtggaccag
ctctggtacaagtacatccacatggaggagattctcggcaacatcgccggcgctaggcag
atattcgagcggtggatgcagtggtctcccgaccagcaaggatggctctcgttcatcaag
ttcgagcttaggtataacgaaatcgaacgcgctagatcgatctacgagaggttcgtgctt
tgtcaccctaaggtttccgcttatattcgattcgctaagtttgagatgaagggaggagaa
gtcgcacgcgcgaggcacgtgtacgaacgcgccacggagaagcttgcggatgacgaggag
gctgagacgctctttgtggcgtttgctgagtttgaggagcggtgcaaggagccggagcgt
gctaggtttatctacaagtttgcgcttgatcatattcctaaagggagggctgaggatttg
tataagaagtttgtggcgtttgagaaacagtatggtgatagggaagggattgaggatgct
attgttgggaagaggaggtttcagtatgaggatgaagtgaggaagaaccctttgaactat
gattcttggtttgattacgttaggcttgaggaaactgtagggaacaaagataggataaga
gagatttatgagagggctattgctaatattccacctgctgaagagaaacgttactggcaa
agatacatctacctctggattaactatgcattgtatgaagagattgaaactgaagatgtg
gagcgtacgcgagatgtatacagagaatgcctcaagcttatcccccactccaaattttcc
tttgccaaaatatggttgctcgctgctcagtttgaaatccggcaactgaatctcgccggt
gctcggcagatattaggaaacgctattgggaaagctccaaaagataagatatttaagaaa
tacattgagattgagctccagctgggaaacatagataggtgtagaaagctctatgagcgt
taccttgagtggtctccagagaattgctatgcttggagcaaatatgctgagctagagagg
tctcttgctgagactgaacgagctagagctatctttgagctggcaatatctcagccagct
cttgacatgcccgaactgctatggaaggcatacatagattttgagatagctgaaggagaa
ttagagaggacacgagctttatatgagcgactcttggaccgcacaaagcattacaaggtg
tgggttagttttgcaaagtttgaagcttcttctgcagaacaagaagaagacgaggaagag
gaaccccaagaagaaatagatgctactgaacgcaagaaagaatgcatcagacgcgccaga
gagattttcgagagagccaacagctactacaaagactctgcaccagagttgaaagaagaa
agagctacactcttagaggattggcttaacatggagacaaactttggcaatctcggggat
gtgagtgtggtacaatctaagctcccgaagaagctcaagaaaagaaaaccaatcacaaga
gaagatggctctacagagtatgaagaatacattgattatctatacccagaagaatcacag
acaacaaatcttaagattcttgaagctgcttacaagtggaagaagcagaagcttgcatct
tctgaggaggattacgattag
DBGET
integrated database retrieval system
