Brassica napus (rape): 106452219
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Entry
106452219 CDS
T04128
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106452219
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
106452219
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
106452219
Prokaryotic type
106452219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
106452219
NCBI-ProteinID:
XP_013749730
UniProt:
A0A816TQK3
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Position
A5:complement(23086237..23090706)
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AA seq
925 aa
AA seq
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MLTSMPHHNLTLLGFSPLKSSSFALFLRPFSLYPILASSPPPSSPRRPRAAGYRRSDPSP
RFPPRRKWSSFEEEKSRQRKGMSSSSDSFEFNKRRAEGKDKIDKPKKSLKRNTRTLNPTN
TIAYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRV
CSETAGGLPGLLLTLAGIGEDGLSVNVWGPSDLKYLVDAMRSFIPRAAMVHTRSFGPSDS
TPQISSSKAKDDPFVLVNDEVVKISAILLEPGSKSGETSVVYVCELPEINGKFDPAKAMA
LGLRAGPKYGKLQSGQSVKSDFKDITVHPSDVMGPSVPGPVVLLVDCPTESHAEELLSTP
SMKSYYSTDGDKFVNCIIHLSPASVTNSATYQSWMKRFHSAQHILAGHETKNMEFPILKA
SSRITARLNYLCPQFFPAPGFWSPQHATDLTNPDSSSKCFGSSLGENVSAENLLKFTLRP
HVNLGIDRSCIPSQLTSSRVIDELLSEIPEISSKTEEVKRLWNGPHNNKMMIEEPWLNES
TVPSCLENIRRDDMEIVLLGTGSSQPSRYRNVSAVYIDLFSRGSMLLDCGEGTLGQLKRR
YGLQGADEAVKKLKCIWISHIHADHHTGLARILARRRELLKGGAREPVIVVGPRPLKNFL
DAYQRLEDLDMEFLDCRNTTSTSWASLETTSPEKTTSNGSAEGSLFSKGSPMQSIYKRPS
SPVTDNASALPYLKKLKRVLGEMGLEDLISFPVVHCPQAFGVVLKAAERKNMAGDKIPGW
KTVYSGDTRPCPQMVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIDVGSSAGVYR
IILTHFSQRYPKIPVIDESHMHNTCIAFDMMSINMADLHVLPKVVPYFKNLFRNVVVDDE
DDEGEEESDDGLMMSVNKVSSFFRN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttcaatgcctcatcataatctaaccctcctcggcttctctcctctaaagtct
tcctctttcgctctcttcctccgacccttttctctctacccaatcctcgcctcttctcct
cctccctcttctcctcgccgtcctcgcgccgccggttaccgacgcagcgacccttctcct
cgcttccctccgcgacgcaagtggagcagcttcgaggaggagaagagtaggcagaggaaa
ggcatgtcgtcgtcttcagattccttcgagtttaacaagaggagagctgagggaaaggat
aagatcgataagcctaagaagagtctcaagaggaacactcgcacgcttaatcccaccaac
accattgcctatgtccagatacttggaacggggatggatacacaggacacgtcaccttct
gtgttactcttttttgacaaacaaagattcatctttaatgctggagagggcttgcaacgt
ttctgtacagaacataaaattaagttatcaaaggtggatcatatatttttatctcgtgtg
tgctcagagacagcaggtggacttccaggtcttctactcactctagctggtatcggagaa
gatggtttatccgtgaacgtatggggtccttcggatctcaagtacttagttgatgctatg
aggtcattcatccctcgtgcagcaatggtacacacacgaagttttggcccatctgactcc
actcctcagattagctcgagtaaagccaaggatgatccctttgttcttgttaatgacgaa
gttgtgaaaatctccgctattctccttgaaccaggaagcaaatctggtgaaacgtcggtt
gtgtatgtttgtgagttacctgaaatcaatggaaaatttgatccggccaaggccatggct
cttggacttagagctggtccaaagtacggtaaacttcagtctggacagtcggtgaagtca
gatttcaaagatatcacggttcatccgagtgatgtgatgggaccttcggttcctggtcct
gttgttttgcttgtggactgtccaacggagtcacacgctgaggaactgctatctactcca
tcgatgaagagttattattcaacagatggggataagtttgttaattgtattatacatttg
agtccagcttctgtgacgaatagtgcgacttaccagagctggatgaagaggtttcattct
gctcagcacattctcgctggacatgagacgaagaatatggagtttcccatcttgaaagct
agttctagaatcacggccagacttaactatctatgcccacagttctttccagctcctgga
ttttggtctcctcaacatgcaactgacttgacaaatccagattcttctagcaagtgcttt
ggttcaagtcttggtgaaaacgtttcagctgaaaatcttctcaagttcactctgcgtcca
catgtcaaccttgggatagacagatcttgtatccctagtcaattaacgtcctcacgagta
atagatgagctactctcagagattcctgagatcagctccaagaccgaagaagtcaagcgt
ttatggaacggaccacacaacaacaagatgatgatcgaagagccgtggctgaacgagagc
actgtcccaagctgtcttgaaaacatcagacgagacgacatggagatagtccttttaggc
accggttcgtcccaaccttcaagatacagaaacgtcagtgcggtttacatcgacctgttc
tctagaggtagcatgctcttggactgcggggaaggcactttggggcagcttaaacgaaga
tacggtttacaaggagctgatgaagcggttaagaaattgaaatgtatatggatctctcac
atccatgctgatcaccacacgggacttgctagaatccttgctcgtagacgtgagcttttg
aaaggaggggctcgtgagccggtgattgtggttggaccaagaccgcttaagaactttctc
gatgcgtatcaaagacttgaggatttggatatggagtttcttgattgtaggaacaccact
tcgacttcttgggcttctctagaaaccaccagccctgagaaaactaccagcaacggtagt
gcagaaggttctttgtttagtaaaggaagtccaatgcagagtatatacaaaagaccgagt
agcccagtaacggacaatgcttcagctttaccgtacttgaagaaactgaaaagggttcta
ggagaaatgggtttagaggatttgattagttttcctgttgtgcattgccctcaagccttt
ggggttgttttaaaagcagcagagagaaagaacatggccggagataagattccgggttgg
aaaactgtttactcaggcgacacaaggccttgtcctcaaatggttgaagcttcaaaagga
gcaactgttcttatacatgaggccacgtttgaggatgcgttggtagaagaagctgttgca
aagaaccatagcacgactaaagaagcaatcgacgttggatcttcggcaggagtgtaccgg
atcatactgactcattttagccagaggtatccgaagattccggtgattgacgagtctcac
atgcacaacacatgcattgctttcgatatgatgagcataaacatggcggatttgcatgtg
cttccaaaggttgttccttacttcaaaaacctgttcagaaacgtggtggttgatgatgaa
gatgatgaaggagaagaagagagtgatgatggtttgatgatgagtgtcaacaaagtctca
agctttttccgcaattag
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