Brevundimonas naejangsanensis: DA69_03565
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Entry
DA69_03565 CDS
T04375
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bne
Brevundimonas naejangsanensis
Pathway
bne03410
Base excision repair
bne03430
Mismatch repair
bne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA69_03565
03430 Mismatch repair
DA69_03565
03440 Homologous recombination
DA69_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bne03400
]
DA69_03565
DNA repair and recombination proteins [BR:
bne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DA69_03565
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DA69_03565
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DA69_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
TBX2-3_RD
Motif
Other DBs
NCBI-ProteinID:
ANF53908
UniProt:
A0A172Y3Y0
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All DBs
Position
744334..746136
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AA seq
600 aa
AA seq
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MADGYGLPAFLGVSRSLSGRAWRQRPAETATTRAHMQALGLDEVMARALSARGVAADQGA
DFLKPTLKALFPDPSSFMDMDAAAAAIVDALQSGASIHVFADYDVDGASSAALLVRWFRA
LGADLPIYVPDRLTEGYGPSARAFDTLKARGADLVITVDCGAAANEAVAHAASIGLKVVV
IDHHMMREEPPACLAVVNPNRPGCGSGQGNLAAAGVVFVLLAALNREARGRGLFEGKTEP
DIRQWLDLAAMGAICDVTGLTGFNRALTSLGLGVMSHWRNPGLRALLAAAGAEPGPAKTN
HAGFILGPRINAGGRIGKSDLGARLLSTDDPDEAQMLAQELDALNLARREVEAEVTEQAV
RRVEATGAHADDSAAVVVSGEDWHPGVVGIVAGRLRERWRKPVIVIGIDAINGVGKGSGR
SQPGMNLGRAVQAAWTDGLLIAGGGHAMAAGLTVAAGRIDELRAFLNERLSDERVEAVAQ
DWVEVDALIDPRAATRDLFDAFEQLAPYGPANPEPLFALEGVQAREPVAMNGGHVRCRLV
GPDGASVRAIAWRCADLPTGKALLAGQGGLNVAGRLKADDWNGRRGVQFEIEDVADPRMV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggttacggcctgcccgcctttctgggggtcagccgctctctgtcggggcgg
gcgtggcggcagcgtccggcggagacggcgacgacccgcgcccatatgcaggcgctgggg
ctggacgaggtgatggctcgcgccctgtcggcgcgcggcgtggcggcggatcagggcgcc
gacttcctcaagccgacgctgaaggcgctgttccccgatccgtccagcttcatggacatg
gacgccgccgccgctgccatcgtcgacgccttgcagagcggcgccagcatccacgtcttc
gccgactacgatgtggacggggcgtccagcgcggccttgctggtacgctggttccgggcg
ctgggcgccgacctgccgatctatgtgccggatcgcctgaccgagggttacggccccagc
gccagggcgttcgacacgctgaaggcgcgcggcgccgatctggtcatcaccgtcgattgc
ggggcggcggctaacgaagcggtggcccatgcggcgtccatcggcctgaaggtcgtggtc
atcgaccaccatatgatgcgcgaggagccgcctgcctgcctggccgtggtcaatccgaac
cggccgggctgcggctcggggcagggcaatctggcggccgcgggggtggtcttcgtcctg
ctggccgccctgaaccgcgaggcgcgcgggcgcggcctgttcgagggcaagactgagccc
gatatccgtcagtggctggacctggccgccatgggcgccatctgcgacgtgacgggcctg
accggcttcaaccgcgctttgaccagtctggggctgggggtcatgtcgcactggcgcaat
ccgggcctgcgcgccctgctggcggcggcgggggctgagccgggaccagccaagaccaac
catgcgggctttatcctggggccgcgcatcaatgcgggcggtcggatcggcaagtcggat
ctgggcgcgcgccttctgtccaccgacgatcctgacgaggcgcagatgctggcgcaggaa
ctggacgccttgaacctcgcgcgccgcgaggtcgaggccgaggtgacggaacaggctgtc
cgccgcgtcgaggcgacgggcgcccatgccgacgacagcgccgccgtggtcgtctcgggc
gaagactggcaccccggcgtggtcggcatcgtcgccgggcgcctgcgcgaacgctggagg
aagccggtcatcgtcatcggcatcgacgccatcaacggcgtgggcaaggggtcgggccga
tcgcagccgggaatgaatctgggccgagcggtgcaggcggcgtggaccgacggcctgctg
atcgccggcggcggccacgccatggccgcgggtctgacggtggcggccggccgcatcgac
gaactgcgcgccttcctcaatgagcgactgtcggacgaacgcgtcgaggccgtggcccag
gactgggtcgaggtcgacgccctgatcgacccgcgcgccgccacccgcgatctgttcgac
gcctttgagcaactggccccctacggccccgccaacccagagcctctgttcgcgctggaa
ggggttcaggcccgcgaaccggtggccatgaacggcggccatgtgcggtgccgtctggtc
gggccggacggcgcctcggtgcgcgccatcgcctggcgctgcgccgacctgccgacgggc
aaggcgctgctggcggggcagggcggcctcaacgtggcgggccgcctgaaagccgacgac
tggaacggccgacgcggcgttcagttcgagatcgaggacgtcgccgatccgcgcatggtc
tga
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