Brettanomyces nanus: FOA43_003562
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Entry
FOA43_003562 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12869
crooked neck
Organism
bnn
Brettanomyces nanus
Pathway
bnn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOA43_003562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bnn03041
]
FOA43_003562
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_003562
Spliceosome [BR:
bnn03041
]
Complex B
Other components
Prp19-related factors
FOA43_003562
Complex C
FOA43_003562
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
FOA43_003562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
Suf
TPR_19
HAT
TPR_CcmH_CycH
NRDE-2
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
62196962
NCBI-ProteinID:
XP_038779741
UniProt:
A0A875S4E2
LinkDB
All DBs
Position
4:724091..725701
Genome browser
AA seq
536 aa
AA seq
DB search
MTETDIDKLSEVHSQITAEQLLSEAYEYRQTPLKTPDYKIADLDELHDFERRKRQEYEDA
LRRNRFDIGQWMRYAQFEVDQHDMPRARSILERALEVDNTNVSLWIRYTHFEIKGKNINH
ARNLLERATSVLPRVDKLWYQYVSVEENLGNVIAARAVFRKWLQWKPGFEVWRHYIEFEE
RYKEYDNCRLIFEKYTTVYPNASTWLYWAAFEKKHGDATNVKNVYKLGLNGIYELGGLTA
EFILSWISWESTIGEEVAIRRLFEFGIKTLNENEVRKLQDDYSKFVKKYGSTQDIEDSVL
NGRKLKYESKLSSNPEDFETWCLYLDLISDPLIHLPPSEIEKKFELAISKRPSSSRKDDW
LPYIYVWFRYITWEKSRSEDIELLRSIYRRVIKIIPHKSFTFPKVWIGFAELEVKHNNLA
EARRVLGQSMGMCPDKEVMNYYITLESNMNQFDRVRTIFNKLIENFSDEEDCWEAYVQFE
SQLGETERADALKNLSREYLQKPDDEDSQIAKAEHPKVLESMSPVRVPFKSRFEEG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaactgatatagacaagttgtctgaagtacattcacaaataacagcagagcaa
cttctatcagaagcctacgagtatcgacagaccccgctaaaaacacccgattataagatt
gcagatcttgatgagctacacgacttcgagagaaggaaacgtcaagaatatgaagatgca
ttaagaagaaatcggtttgatatcgggcaatggatgagatatgcccagtttgaggtggat
caacatgatatgcctagagctcgatcaattttagagagggctttagaggtagataataca
aatgtgtcgttatggattagatatacacactttgagattaaggggaagaatataaatcat
gctagaaacttgttggaaagggctacatccgttttacctagagtagataagttatggtac
caatacgtatcggtggaagaaaatctcggtaacgtaatagcggcgagggccgtgtttcgc
aaatggcttcagtggaaaccgggttttgaggtgtggaggcactatatcgaattcgaagaa
aggtataaagagtacgataattgtcgtttgatatttgagaaatatactactgtttatccg
aatgcaagtacgtggctatattgggctgcattcgagaagaagcatggcgatgcgacaaat
gtgaaaaatgtctataagctcggtctcaacggtatttatgaacttggaggattgacagca
gaatttatcttatcttggatatcatgggaatctaccattggggaagaagttgccatcaga
cggctttttgaatttggtatcaagacattgaatgagaacgaggttcgaaaacttcaagac
gattattcaaaatttgtgaagaaatatggaagtactcaagatatagaagactctgttcta
aatggaaggaaacttaaatacgaaagtaaactttcaagcaatccagaagacttcgaaact
tggtgtttgtatctagatctcataagtgatcccctaattcatcttccaccgtcagaaatc
gaaaagaaatttgaacttgctatctcaaaaagaccctcttcatcacgaaaggatgattgg
ctaccttatatatatgtttggttcaggtatattacttgggaaaagtcgagaagcgaagat
atagaactgttaagatcgatttatcgtcgggtgatcaaaataattcctcataagtcattc
acctttccgaaagtgtggattggatttgctgaacttgaagttaagcacaataatttggct
gaggcacgtagggtgttaggacaatcaatgggaatgtgcccggataaggaggtcatgaat
tattatattacattagagtcaaatatgaatcagtttgacagagtgaggacaatcttcaat
aagctaatagaaaacttctccgatgaagaagattgttgggaagcctatgtacagttcgaa
agccaattaggtgaaacagaaagggctgatgcattaaaaaatctatctagggaataccta
cagaaaccagatgatgaggacagtcagattgcaaaagcagagcacccaaaagtactcgaa
agtatgtcacccgtacgagtacccttcaaaagcaggtttgaagaaggctaa
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