Bacillus nitratireducens: GSN03_00570
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Entry
GSN03_00570 CDS
T07605
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bnt
Bacillus nitratireducens
Pathway
bnt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSN03_00570 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnt03021
]
GSN03_00570 (rpoB)
03400 DNA repair and recombination proteins [BR:
bnt03400
]
GSN03_00570 (rpoB)
Enzymes [BR:
bnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GSN03_00570 (rpoB)
Transcription machinery [BR:
bnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GSN03_00570 (rpoB)
DNA repair and recombination proteins [BR:
bnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GSN03_00570 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QUG82071
LinkDB
All DBs
Position
107921..111454
Genome browser
AA seq
1177 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYSVDECKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEITELLGDNEYLSNTLEKDNTDSTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAAEGTILDRRTLDRILPYLEKNIGFKTAKPMGGVVEGDVELQSIKIYAPESEGERSI
NVIGNANITRDVKHITPGDILASISYFFNLLYKVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNEFG
FIETPYRRVDPETGLVTGHVDYLTADEEDNYVVAQANMKLSEEGEFLDEDIVARFRGENI
VTNKERIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGTG
MEYVSAKDSGAAVICKHPGVVERVEAREIWVRRYVEVDGQIVKGDLDRYKMQKFIRSNQG
TCYNQRPIVSVGNEVVKGEILADGPSMELGELALGRNVLVGFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDEL
PPGVNQLVRAYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHIATPVFDGAREEDVWGTIEEAGMANDAKTILYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVIGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKMMSSDDTEIEMRDTEDDDDHQSADKLNVEVETTKE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatacggacgccaccgccaacgaagaagttatgcccgtatt
agtgaagtattagagttaccaaatcttatcgaaattcaaacctcttcttatcagtggttt
cttgatgagggtttgcgagaaatgttccaagacatttctccgatcgaagactttacggga
aatctatcgcttgaatttatcgactacagcttaggtgaacctaaatactctgtagacgaa
tgcaaagagcgtgatgtgacgtatgcagcaccacttcgtgtaaaagtgcgtctaatcaac
aaggaaactggtgaagtaaaagaacaagatgtgttcatgggagatttcccactcatgaca
gagactggaacattcgtaattaacggtgcagaacgtgttatcgtttcccagttagttcgc
tctccaagcgtatactatagtggcaaagtggataaaaacggaaaacgtggttttactgct
actgtaattccaaaccgcggagcttggttagagtatgaaacagatgctaaggatgttgta
tatgtgcgtattgaccgtacgcgtaaacttcctgtaactgttttgttacgcgcattaggg
tttggctctgatcaagaaatcaccgagcttttaggtgataacgaatacttaagcaatacg
ttagaaaaagacaacacagatagcacagaaaaagcattgcttgaaatttatgagcgtcta
cgtcctggtgaaccaccaacagtagaaaatgcgaagagcttacttgtgtctcgtttcttt
gatccgaagcgctacgatttagcaaatgtaggtcgctacaagatcaacaaaaagctacac
attaaaaacagattgtttaaccaacgtttagctgaaacattagtggatccagaaactggt
gaaattttagcggcagaaggaacaatcttagatcgtcgtacactggatcgcattttacct
tacttagagaagaacattggattcaaaacagcgaaaccaatgggtggagtggtagaaggc
gatgttgagctgcaatctattaagatttatgctccagaatcagaaggcgaacgttctatc
aacgtaattgggaatgcaaatattactcgcgatgtaaaacacatcacaccaggtgatatt
ctggcttctattagttacttcttcaacttactatacaaagtaggggatacagatgatatt
gaccacttaggaaaccgtcgtctgcgttcagtaggagaactattacaaaaccaattccgt
atcggtctttctcgtatggaacgtgttgttcgtgagagaatgtcgattcaagatacaaat
gcaattacaccacaggcattaatcaatattcgtcctgttattgcatctattaaagagttc
ttcggaagttctcagttatctcagttcatggaccaaacaaacccattagcagagttaact
cacaaacgaagactatctgcattaggacccggtggtttaacgcgtgagcgcgcaggcttt
gaagtacgtgacgttcactactctcactatggtcgtatgtgtccaattgaaacaccagag
ggaccaaacatcggtttgattaactcattatcttcgttcgcgaaagtaaatgagtttggt
ttcatcgaaacaccataccgtcgtgttgacccagaaactggtcttgtaacagggcatgtt
gattatttaacagcagatgaagaagataattatgttgtagcccaagcgaatatgaaatta
tctgaagaaggggaattccttgatgaagatatcgtagctcgtttccgtggtgaaaacatt
gtcacaaataaagagcgcatcgactacatggatgtatctccaaaacaagtagtgtcggca
gcgacagcttgtattccgttcttagaaaacgatgactctaaccgcgcacttatgggagcg
aacatgcaacgtcaggcggttccgttaatgaatccggaatcaccgattgtaggtacaggt
atggagtacgtatcagcaaaagactcaggtgctgcagtaatctgtaaacaccctggtgtt
gttgagcgcgtagaagcacgtgaaatttgggtacgtcgctatgtagaagttgacggtcaa
atagtaaaaggcgacttagatcgctacaaaatgcaaaaattcattcgttctaaccaagga
acttgttacaaccaacgtccaatcgtaagtgttggaaatgaagttgtaaaaggtgaaatc
cttgcggatggtccttctatggaactaggcgaactagcacttggacgtaacgtgcttgtt
ggcttcatgacatgggacggttataactacgaggatgcaatcatcatgagtgagcgcctt
gtaaaagatgatgtgtacacttctattcatattgaagaatatgagtcagaagctcgtgat
acgaagcttggaccagaagaaattacacgtgatatcccgaatgttggagaagatgcactt
cgtaaccttgacgagcgcggtattattcgcgtcggtgctgaagtaaaagatggagaccta
cttgttggtaaagtaacaccaaaaggtgtaacagaattaacggcagaagaacgtctatta
catgcaatcttcggtgaaaaagcacgtgaagtacgtgatacatcactacgtgtaccacac
ggtggtggcggtattatcttagacgtaaaagtattcaaccgtgaagatggcgatgaattg
ccaccaggcgtgaatcaacttgtacgtgcatatatcgttcaaaaacgtaaaatttctgaa
ggtgacaagatggccggacgtcacggtaacaaaggtgttatctctcgtattttaccagaa
gaagatatgccttacttaccagacggtacgccaatcgatatcatgttaaacccattaggg
gtaccatctcgtatgaatatcggtcaggtattagagcttcatcttggtatggcagcaaga
tatcttggtattcacattgcaacaccagtattcgatggtgctcgtgaggaagatgtatgg
ggcacaattgaagaagctggtatggcaaatgacgcgaaaacaatcctgtatgacggacgt
actggtgaaccgttcgataaccgtgtatctgttggtgtcatgtatatgatcaaacttgcg
cacatggttgacgataaacttcatgctcgttctactggaccgtactcacttgtaacgcag
caacctcttggaggtaaagctcagttcggtggacagcgtttcggtgagatggaggtttgg
gcacttgaggcttacggtgctgcttatactcttcaagaaatcttaacagtgaagtctgat
gatgttattggacgtgttaagacgtatgaagcaattgttaaaggcgaaaatgttccagaa
ccaggcgttccagaatcattcaaagtattgattaaagaactgcaaagtttaggtatggac
gttaaaatgatgtctagcgacgacacagaaattgaaatgcgtgatacggaagatgacgat
gatcatcaatcagcagataaattgaatgtcgaagttgagacaactaaggaataa
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