Bacillus nitratireducens: GSN03_20440
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Entry
GSN03_20440 CDS
T07605
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bnt
Bacillus nitratireducens
Pathway
bnt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GSN03_20440 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnt03021
]
GSN03_20440 (rpoD)
Transcription machinery [BR:
bnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GSN03_20440 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2408
Motif
Other DBs
NCBI-ProteinID:
QUG85696
LinkDB
All DBs
Position
complement(4014771..4015898)
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AA seq
375 aa
AA seq
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MADKPARSKQIETEMTLEQVKEQLTELGKKRGVLTYEEIAERMNGFEIESDQMDEYYEYL
GEQGIDLVGDNDNDEGPNNRQITKTEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLS
AEEEIRLATRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PSPEEIGEEMDLAPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPADHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaaccagctcgttctaaacaaattgaaactgaaatgacccttgagcaagtg
aaagaacaactcactgagctcggaaaaaaacgtggcgttcttacatatgaagagattgca
gaacgcatgaatggatttgaaattgaatccgatcaaatggatgaatactatgaatattta
ggtgaacaagggattgacttagttggtgacaatgacaacgacgaaggtcctaataatcgc
caaattacaaaaacggaagaagaatttgaccttaatgatttaagtgtgccgccaggtgtg
aaaatcaatgaccctgttcgtatgtacttaaaagaaattggtcgtgtagacttactatct
gctgaagaagaaattcgacttgcgacacgtattgaagaaggcgatgaagaagcaaaacgc
cgtcttgcggaagcaaacttacgtcttgtagtaagtattgcaaagcgctacgtgggccgt
ggtatgcttttcttagacttaatccaagaaggaaatatgggtctaattaaggcagttgaa
aagttcgactaccgtaaaggttttaaatttagtacgtatgcaacttggtggattcgccaa
gctattacacgtgcgattgcagaccaagcgcgaacaattcgtattccagttcatatggtt
gaaacaattaataagttaatccgtgtacaacgtcaattattacaagatttaggacgcgaa
ccatcacctgaagagattggtgaagaaatggatcttgctccagaaaaagtacgcgaaatt
ttaaaaattgcacaggagccagtttctcttgaaacaccaattggtgaagaagatgactcc
catttaggtgactttattgaagaccaagaagcaacatcgcctgcggaccatgcagcgtat
gagttgctaaaagaacaattagaagatgtgttagatacactaacagatcgtgaagaaaat
gttctgcgtcttcgttttggtttagatgatggacgaactcgtacgcttgaagaagttggg
aaagtattcggcgtaacgagagagcgtattcgtcaaattgaagcgaaagcacttcgcaaa
ttaagacatccaagccgtagtaagcgtcttaaggatttcttagaatag
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