Bacillus nitratireducens: GSN03_26925
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Entry
GSN03_26925 CDS
T07605
Name
(GenBank) PKD domain-containing protein
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
bnt
Bacillus nitratireducens
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bnt01002
]
GSN03_26925
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
bnt02042
]
GSN03_26925
Enzymes [BR:
bnt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
GSN03_26925
Peptidases and inhibitors [BR:
bnt01002
]
Metallo peptidases
Family M9
GSN03_26925
Bacterial toxins [BR:
bnt02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
GSN03_26925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
ColG_sub
Peptidase_M9_N
PKD_4
PKD
DUF1433
SEA
Motif
Other DBs
NCBI-ProteinID:
QUG87044
LinkDB
All DBs
Position
pBM02-1:150338..153244
Genome browser
AA seq
968 aa
AA seq
DB search
MNKKSKFTQMMLGISTVALSFGSIQTQVSAEEKTTYNVLQVKPTGIETSKDELAHSTKAD
ETLSYEERLKVNDFSQRPAPAVKQAAAKQSQQKYSLAELNRMSNDEFIDTLGNISWNQIT
DLDQFNQETKEFYQNKERIQVIIDELGRRGSTFTKDDTKGIETFAEVLRSISYVGFNNKE
VSYLNERSFHDKCLPALKAIAKNPNFKFGTDKQDAVVSAYGKLIRNASCDAETVQYAANI
LKQYNDNFSTYISDKKKGDALYELIQGIDDDIQSYLFETRKKADETIWYGKIDGYINEVS
RMALLNHVTTENKWLINNGIYYTGRLGNFHSNPNKPLEVLTQAMHMYPRLSEAYFNAVEQ
ISTNYGGKDYNGNTVDFKKIREEGQQQYLPKTYTFDDGSIVFKTGDKVTEEKVKKLYWAA
KEVKAQYHRVIGKDGSLESGKADDVLTIVIYNNPDEYKRNSQLYGYDTNNGGIYIEGIGT
FFTFERTPQQSRYSLEELFRHEFTHYLQGRYEVPGSWGQGEMYQDQRLTWFEEGNAEFFA
GSTRTNNVVPRKSIISGLSSDPAKRYTAERTLFSKYGEGEGDEKWDFYNYSFALQSYLYT
HQFEIFDKIQDFIRANDVKNYDAYREALSKDPNLNKGYQDYMKQLIDNQGTYNTPQVSDD
YLATPSPKPLADVKKDITDVAKIKDATITKHKSQFFDTFTLEGTYTGGVTKGESEDWKTM
SKKINQSLEQLAQKEWSGYKTVTAYFVNYRVNAKNQFEYDVVFHGVATGEEEKQTVKVNM
NGPYNEILNEKVEFHSDGTESTGGKIVSYLWDFGDGTTSTEANPTHVYGKEGTYTAKLTV
KDNKGKVGRGQTSVTVKQDEPAGHNYQNAKVIRFNKLSKGNMDRPNMAYMHTFNVTSPKE
VDISFIDEQGIGIQWDVYHESDLEHPVITGQADGNNIKGKFEAKPGKYYLVSFFEKENGK
GTYSLVVK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaatcaaaatttactcaaatgatgctcggtattagtacagtggccttatca
tttggaagtattcaaacacaagtatcagcggaagaaaaaacaacttataatgtgttacaa
gtgaaaccaactgggatagaaacttcaaaagatgaacttgcacattctacaaaagcagac
gaaacattgtcttatgaagaacgtttaaaagtgaacgatttttcacaacgtccagctccg
gccgtgaaacaagcagcggcaaaacaatctcagcaaaagtattctttagcagagctaaat
agaatgagtaatgacgaattcatcgatacattgggaaacattagttggaatcaaattaca
gatttagatcaatttaatcaagaaacaaaagagttttatcaaaataaagagcgaatacag
gttattattgatgaattaggtcgtcgtggaagcacatttacaaaagatgatacaaaaggg
attgagacgtttgctgaagtattacgttccatatcttatgtaggctttaataataaagag
gtaagctatttaaatgagcgaagctttcatgataaatgtttacctgcattaaaagcaatt
gcaaaaaatccgaattttaaatttggtacagataaacaggatgcagtggtatctgcatac
ggtaaattaattagaaacgcttcttgtgatgctgaaacagttcaatatgcggcgaatata
ttaaagcaatataacgataatttttccacatatataagtgacaagaagaaaggggacgcc
ttgtatgagcttatacaagggattgatgatgatatacagtcttacttgtttgagacacgt
aaaaaagcggatgaaacaatatggtatggcaaaattgatggttacataaatgaagttagt
cgaatggctcttttgaaccatgtaacaacagaaaataaatggttaattaataatggtatt
tattatactggtcgtttagggaatttccatagtaatccaaataaacctttagaagtactt
acacaagcaatgcatatgtaccctcgtttaagtgaggcttattttaatgcggtagagcaa
atttcaacaaactatggtggaaaagattataacggaaatacagtagattttaagaaaata
cgtgaagaaggccagcagcagtacttaccaaaaacgtatacattcgatgacggctctatt
gtatttaaaacaggagataaagtaacggaagaaaaggttaagaaactatattgggctgca
aaagaagtaaaagcgcagtatcatcgtgtaattggaaaagatggatcgttagaatcaggg
aaagctgatgatgtactgacaatcgtcatttataataatccagatgaatataaacgaaat
agccaactatatggatatgatacgaataatggtggaatttatattgaaggaatcggaaca
ttctttacatttgagcgtacaccgcagcaaagtcgttatagtttggaagaattgttccgt
catgaatttacacactatttacagggaagatacgaagttccaggatcatggggacaagga
gaaatgtatcaagatcaacgtttgacttggtttgaagaaggaaatgcagaattttttgca
ggatctactcgtacgaataatgttgttccgcgcaaaagtataattagtggattatcatct
gatcctgcgaaacgttatacagcagaacgaacattattttcgaaatatggagaaggagaa
ggagacgaaaaatgggacttttataattattcttttgcactgcagtcttacttatatact
catcaatttgaaatcttcgataagattcaagatttcattcgtgcaaatgatgtgaagaat
tatgatgcatatcgtgaagctttaagtaaggatccaaatttaaataaaggataccaagac
tatatgaagcagttaattgataatcagggtacatataatactccgcaagtatcagatgat
tatttagctaccccttcaccaaagccactagctgatgtaaagaaagacattacagatgta
gcaaagataaaagatgcaacgattacaaagcataagtctcaattttttgatacgtttaca
ttagaagggacatatacaggtggcgtaacaaaaggagaatctgaggattggaaaacgatg
agcaagaaaatcaatcaatctttagaacagttagcgcaaaaagaatggagcggctacaaa
acagttacagcgtattttgttaattatcgtgtgaatgcgaaaaatcaatttgaatatgat
gttgtattccatggtgttgcaacgggagaagaagaaaaacagactgttaaagtaaatatg
aatggaccgtacaatgaaatattaaatgaaaaagttgagtttcatagcgatggtacagaa
agcacaggtggaaaaattgtttcttatctctgggattttggggatggtacaacaagtaca
gaagcaaatcccactcatgtatatggaaaagagggaacatatactgcaaagctaacagtg
aaagataataaaggaaaagtaggccgaggacaaacatcggttaccgtaaaacaggatgag
ccagcaggtcataactatcaaaatgcaaaggtaattcgttttaataagctttcaaaagga
aatatggatcgtccgaatatggcgtatatgcacacattcaatgtcacatctccaaaagaa
gtagatatttcttttatagatgaacagggaattgggatacaatgggatgtatatcacgaa
tcagatttagaacatcctgttattacgggccaagcggatggaaataatataaaagggaaa
tttgaagcgaaacctgggaagtattatttagtttcattttttgaaaaggaaaacggaaag
ggaacatattcattagtagtaaaataa
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