KEGG   Bombella sp. ESL0368: GN304_07640
Entry
GN304_07640       CDS       T06372                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bob  Bombella sp. ESL0368
Pathway
bob02024  Quorum sensing
bob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GN304_07640 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GN304_07640 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bob03019]
    GN304_07640 (hfq)
   03036 Chromosome and associated proteins [BR:bob03036]
    GN304_07640 (hfq)
Messenger RNA biogenesis [BR:bob03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GN304_07640 (hfq)
Chromosome and associated proteins [BR:bob03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GN304_07640 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: QGT75608
LinkDB
Position
complement(1698077..1698304)
AA seq 75 aa
MSEQRTGDVQEQFLAHVQQREEPVTVFLVNGVKLQGVITRFDGRSVLLRRDGHVQLVYKH
AISTIMPVAALSDLP
NT seq 228 nt   +upstreamnt  +downstreamnt
atgtcagaacagagaacaggcgacgtgcaggagcagtttctggcccatgtgcagcagcgg
gaagaaccggtgacggtttttctggtcaatggtgtcaagcttcagggggtcatcacacgg
tttgatggtcgcagtgtgctgctccgccgggacgggcatgtgcagctcgtctacaaacat
gcgatcagcaccatcatgcccgtggcggctctttcggacctgccctga

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